RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 MAP3K15Q6ZN16 1313 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 ERVV-1B6SEH8 477 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 NBR1Q14596 966 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 COL13A1Q5TAT6 717 aaPredicted RBP9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 LRP10Q7Z4F1 713 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 ZNF34Q8IZ26 560 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 SYNE4Q8N205 404 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 JMYQ8N9B5 988 aa9.93□□□□□ -0.82
GPATCH8-206ENST00000588554 TMPOP42166 694 aaKnown RBP9.92□□□□□ -0.82
GPATCH8-206ENST00000588554 FKBP4Q02790 459 aaKnown RBP eCLIP9.92□□□□□ -0.82
GPATCH8-206ENST00000588554 CRY2Q49AN0 593 aa9.92□□□□□ -0.82
GPATCH8-206ENST00000588554 KIF6Q6ZMV9 814 aa9.92□□□□□ -0.82
GPATCH8-206ENST00000588554 LAMB4A4D0S4 1761 aa9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 COL9A1P20849 921 aa9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 ALDH1B1P30837 517 aa9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 AIMP1Q12904 312 aaKnown RBP9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 RALBP1Q15311 655 aa9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 SOGA3Q5TF21 947 aa9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 PNNQ9H307 717 aaKnown RBP9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 NUP98P52948 1817 aa9.91□□□□□ -0.82
GPATCH8-206ENST00000588554 COL4A5P29400 1685 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 DICER1Q9UPY3 1922 aaKnown RBP9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 NTSR2O95665 410 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 IARSP41252 1262 aaKnown RBP9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 COPS6Q7L5N1 327 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 RTKN2Q8IZC4 609 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 NYXQ9GZU5 481 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 NBPF3Q9H094 633 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 TAF1DQ9H5J8 278 aaPredicted RBP9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 MKRN1Q9UHC7 482 aaKnown RBP9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 ARFGEF2Q9Y6D5 1785 aa9.9□□□□□ -0.82
GPATCH8-206ENST00000588554 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 GOLGA8CPA6NN73 597 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 FZD9O00144 591 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 MAP3K7O43318 606 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 HOXA10P31260 410 aaPredicted RBP9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 MRPL50Q8N5N7 158 aaKnown RBP9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 SNED1Q8TER0 1413 aa9.89□□□□□ -0.83
GPATCH8-206ENST00000588554 CHL1O00533 1208 aa9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 ITGBL1O95965 494 aaPredicted RBP9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 FMR1Q06787 632 aaKnown RBP eCLIP9.88□□□□□ -0.835e-13■■■■■ 63.4
GPATCH8-206ENST00000588554 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 RBM17Q96I25 401 aaKnown RBP9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 RABGEF1Q9UJ41 708 aa9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
GPATCH8-206ENST00000588554 MYBBP1AQ9BQG0 1328 aaKnown RBP9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 EPHX2P34913 555 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 PROX2Q3B8N5 592 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 SLC10A5Q5PT55 438 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 MAP1SQ66K74 1059 aaPredicted RBP9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 PPP1R42Q7Z4L9 355 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 RUNDC1Q96C34 613 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 CRAMP1Q96RY5 1269 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 PSMD1Q99460 953 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 UTP14AQ9BVJ6 771 aaKnown RBP9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 CHPF2Q9P2E5 772 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 HACL1Q9UJ83 578 aa9.87□□□□□ -0.83
GPATCH8-206ENST00000588554 ERBB4Q15303 1308 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 PASKQ96RG2 1323 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 IQCA1LA6NCM1 817 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 HSPA1AP0DMV8 641 aaKnown RBP9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 HSPA1BP0DMV9 641 aaKnown RBP9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 EPS15P42566 896 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 NLRP10Q86W26 655 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 LDHDQ86WU2 507 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 LARGE2Q8N3Y3 721 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 JDP2Q8WYK2 163 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 NLRP3Q96P20 1036 aa9.86□□□□□ -0.83
GPATCH8-206ENST00000588554 ABCC4O15439 1325 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 ELL2O00472 640 aaPredicted RBP9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 TCIRG1Q13488 830 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 WDR43Q15061 677 aaKnown RBP eCLIP9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 AOC3Q16853 763 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 PARP10Q53GL7 1025 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 GPC2Q8N158 579 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 DDX21Q9NR30 783 aaKnown RBP eCLIP9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 TRMT112Q9UI30 125 aaKnown RBP9.85□□□□□ -0.83
GPATCH8-206ENST00000588554 ATP5J2-PTCD1G3V325 749 aa9.84□□□□□ -0.83
GPATCH8-206ENST00000588554 SCNN1DP51172 638 aa9.84□□□□□ -0.83
GPATCH8-206ENST00000588554 LMOD3Q0VAK6 560 aa9.84□□□□□ -0.83
GPATCH8-206ENST00000588554 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
GPATCH8-206ENST00000588554 FAM89AQ96GI7 184 aa9.84□□□□□ -0.83
GPATCH8-206ENST00000588554 ATP6V0A2Q9Y487 856 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms