RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 XDHP47989 1333 aa23.17■■□□□ 1.3
HMG20B-216ENST00000585900 GCKRQ14397 625 aa23.17■■□□□ 1.3
HMG20B-216ENST00000585900 LINS1Q8NG48 757 aa23.17■■□□□ 1.3
HMG20B-216ENST00000585900 H7C1D1 291 aa23.16■■□□□ 1.3
HMG20B-216ENST00000585900 TTLL11Q8NHH1 800 aa23.16■■□□□ 1.3
HMG20B-216ENST00000585900 SPINK5Q9NQ38 1064 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-216ENST00000585900 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
HMG20B-216ENST00000585900 H7C1W4 665 aa23.15■■□□□ 1.3
HMG20B-216ENST00000585900 PSMD14O00487 310 aa23.15■■□□□ 1.3
HMG20B-216ENST00000585900 DOK7Q18PE1 504 aa23.15■■□□□ 1.3
HMG20B-216ENST00000585900 GPR101Q96P66 508 aaPredicted RBP23.15■■□□□ 1.3
HMG20B-216ENST00000585900 CNOT7Q9UIV1 285 aaKnown RBP23.15■■□□□ 1.3
HMG20B-216ENST00000585900 ABT1Q9ULW3 272 aaKnown RBP23.15■■□□□ 1.3
HMG20B-216ENST00000585900 CACNA1FO60840 1977 aa23.14■■□□□ 1.3
HMG20B-216ENST00000585900 HSPA1AP0DMV8 641 aaKnown RBP23.14■■□□□ 1.29
HMG20B-216ENST00000585900 HSPA1BP0DMV9 641 aaKnown RBP23.14■■□□□ 1.29
HMG20B-216ENST00000585900 RPS12P25398 132 aaKnown RBP23.14■■□□□ 1.29
HMG20B-216ENST00000585900 MICALL2Q8IY33 904 aa23.14■■□□□ 1.29
HMG20B-216ENST00000585900 DPF2Q92785 391 aa23.14■■□□□ 1.29
HMG20B-216ENST00000585900 GREM2Q9H772 168 aa23.14■■□□□ 1.29
HMG20B-216ENST00000585900 ATP2B4P23634 1241 aa23.13■■□□□ 1.29
HMG20B-216ENST00000585900 IGHMBP2P38935 993 aaKnown RBP23.13■■□□□ 1.29
HMG20B-216ENST00000585900 IFFO2Q5TF58 517 aa23.13■■□□□ 1.29
HMG20B-216ENST00000585900 BSDC1Q9NW68 430 aaPredicted RBP23.13■■□□□ 1.29
HMG20B-216ENST00000585900 MYH3P11055 1940 aa23.12■■□□□ 1.29
HMG20B-216ENST00000585900 ZC3H15Q8WU90 426 aaKnown RBP23.12■■□□□ 1.29
HMG20B-216ENST00000585900 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
HMG20B-216ENST00000585900 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
HMG20B-216ENST00000585900 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
HMG20B-216ENST00000585900 TRPM4Q8TD43 1214 aa23.1■■□□□ 1.29
HMG20B-216ENST00000585900 RASSF10A6NK89 507 aa23.09■■□□□ 1.29
HMG20B-216ENST00000585900 F6X3S4 739 aa23.09■■□□□ 1.29
HMG20B-216ENST00000585900 TRAF5O00463 557 aa23.09■■□□□ 1.29
HMG20B-216ENST00000585900 MINPP1Q9UNW1 487 aa23.09■■□□□ 1.29
HMG20B-216ENST00000585900 ZNF521Q96K83 1311 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 ITGA6P23229 1130 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 VEGFBP49765 207 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 CASP7P55210 303 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 MPHOSPH8Q99549 860 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 PGAP2Q9UHJ9 254 aa23.08■■□□□ 1.29
HMG20B-216ENST00000585900 MED23Q9ULK4 1368 aa23.07■■□□□ 1.28
HMG20B-216ENST00000585900 SHTN1A0MZ66 631 aa23.07■■□□□ 1.28
HMG20B-216ENST00000585900 HIRAP54198 1017 aaPredicted RBP23.07■■□□□ 1.28
HMG20B-216ENST00000585900 BEND3Q5T5X7 828 aa23.07■■□□□ 1.28
HMG20B-216ENST00000585900 PAXIP1Q6ZW49 1069 aaPredicted RBP23.07■■□□□ 1.28
HMG20B-216ENST00000585900 CDC37L1Q7L3B6 337 aa23.07■■□□□ 1.28
HMG20B-216ENST00000585900 GLIS2Q9BZE0 524 aaPredicted RBP23.07■■□□□ 1.28
HMG20B-216ENST00000585900 KCNQ5Q9NR82 932 aa23.07■■□□□ 1.28
HMG20B-216ENST00000585900 PCNTO95613 3336 aa23.07■■□□□ 1.28
HMG20B-216ENST00000585900 VIL1P09327 827 aaKnown RBP23.06■■□□□ 1.28
HMG20B-216ENST00000585900 CCT4P50991 539 aaKnown RBP23.06■■□□□ 1.28
HMG20B-216ENST00000585900 FMR1Q06787 632 aaKnown RBP eCLIP23.06■■□□□ 1.28
HMG20B-216ENST00000585900 TBC1D10BQ4KMP7 808 aaPredicted RBP23.06■■□□□ 1.28
HMG20B-216ENST00000585900 SAMD7Q7Z3H4 446 aa23.06■■□□□ 1.28
HMG20B-216ENST00000585900 AIDAQ96BJ3 306 aa23.06■■□□□ 1.28
HMG20B-216ENST00000585900 ANKRD2Q9GZV1 360 aa23.06■■□□□ 1.28
HMG20B-216ENST00000585900 ANKRD18BA2A2Z9 1011 aa23.05■■□□□ 1.28
HMG20B-216ENST00000585900 E9PSI1 815 aa23.05■■□□□ 1.28
HMG20B-216ENST00000585900 CSF1RP07333 972 aa23.05■■□□□ 1.28
HMG20B-216ENST00000585900 PODNQ7Z5L7 613 aa23.05■■□□□ 1.28
HMG20B-216ENST00000585900 CHMP3Q9Y3E7 222 aa23.05■■□□□ 1.28
HMG20B-216ENST00000585900 SPEF2Q9C093 1822 aa23.05■■□□□ 1.28
HMG20B-216ENST00000585900 CELF2O95319 508 aaKnown RBP23.04■■□□□ 1.28
HMG20B-216ENST00000585900 ECE1P42892 770 aa23.04■■□□□ 1.28
HMG20B-216ENST00000585900 KIF4BQ2VIQ3 1234 aa23.04■■□□□ 1.28
HMG20B-216ENST00000585900 RSBN1LQ6PCB5 846 aaPredicted RBP23.04■■□□□ 1.28
HMG20B-216ENST00000585900 SLC4A10Q6U841 1118 aa23.04■■□□□ 1.28
HMG20B-216ENST00000585900 AGBL3Q8NEM8 1001 aa23.04■■□□□ 1.28
HMG20B-216ENST00000585900 LEMD3Q9Y2U8 911 aa23.04■■□□□ 1.28
HMG20B-216ENST00000585900 ZNF609O15014 1411 aa23.04■■□□□ 1.28
HMG20B-216ENST00000585900 USP17L3A6NCW0 530 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 USP17L4A6NCW7 530 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 GRM8O00222 908 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 KCNJ4P48050 445 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 IFIT5Q13325 482 aaKnown RBP23.03■■□□□ 1.28
HMG20B-216ENST00000585900 RBM26Q5T8P6 1007 aaKnown RBP23.03■■□□□ 1.28
HMG20B-216ENST00000585900 CST9Q5W186 159 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 USP17L1Q7RTZ2 530 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 ZNF408Q9H9D4 720 aa23.03■■□□□ 1.28
HMG20B-216ENST00000585900 C9orf78Q9NZ63 289 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-216ENST00000585900 WDR33Q9C0J8 1336 aaKnown RBP23.03■■□□□ 1.28
HMG20B-216ENST00000585900 TRPM7Q96QT4 1865 aa23.02■■□□□ 1.28
HMG20B-216ENST00000585900 ALDH1L1O75891 902 aa23.02■■□□□ 1.28
HMG20B-216ENST00000585900 COL13A1Q5TAT6 717 aaPredicted RBP23.02■■□□□ 1.28
HMG20B-216ENST00000585900 DCPSQ96C86 337 aaKnown RBP23.02■■□□□ 1.28
HMG20B-216ENST00000585900 SRCIN1Q9C0H9 1055 aa23.02■■□□□ 1.28
HMG20B-216ENST00000585900 TLL2Q9Y6L7 1015 aa23.02■■□□□ 1.28
HMG20B-216ENST00000585900 SCN9AQ15858 1988 aa23.01■■□□□ 1.27
HMG20B-216ENST00000585900 ZNF804BA4D1E1 1349 aa23.01■■□□□ 1.27
HMG20B-216ENST00000585900 GRM1Q13255 1194 aa23■■□□□ 1.27
HMG20B-216ENST00000585900 KRT26Q7Z3Y9 468 aa23■■□□□ 1.27
HMG20B-216ENST00000585900 CAPNS2Q96L46 248 aa23■■□□□ 1.27
HMG20B-216ENST00000585900 COA1Q9GZY4 146 aa23■■□□□ 1.27
HMG20B-216ENST00000585900 EGFRP00533 1210 aa22.99■■□□□ 1.27
HMG20B-216ENST00000585900 FOXO4P98177 505 aa22.99■■□□□ 1.27
HMG20B-216ENST00000585900 MAP2K1Q02750 393 aaPredicted RBP22.99■■□□□ 1.27
HMG20B-216ENST00000585900 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
HMG20B-216ENST00000585900 TAF7LQ5H9L4 462 aa22.99■■□□□ 1.27
HMG20B-216ENST00000585900 USP48Q86UV5 1035 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms