RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 NISCHQ9Y2I1 1504 aa44.89■■■■■ 4.78
HMG20B-216ENST00000585900 CCDC180Q9P1Z9 1646 aa40.17■■■■■ 4.02
HMG20B-216ENST00000585900 ABCC9O60706 1549 aa39.81■■■■□ 3.96
HMG20B-216ENST00000585900 RB1CC1Q8TDY2 1594 aa38.1■■■■□ 3.69
HMG20B-216ENST00000585900 NACADO15069 1562 aa37.9■■■■□ 3.66
HMG20B-216ENST00000585900 DCAF8L2P0C7V8 631 aa37.77■■■■□ 3.64
HMG20B-216ENST00000585900 MYO15BQ96JP2 1530 aa37.5■■■■□ 3.59
HMG20B-216ENST00000585900 ZCCHC6Q5VYS8 1495 aaKnown RBP37.3■■■■□ 3.56
HMG20B-216ENST00000585900 DCAF1Q9Y4B6 1507 aa37.13■■■■□ 3.53
HMG20B-216ENST00000585900 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
HMG20B-216ENST00000585900 PABPN1Q86U42 306 aaKnown RBP eCLIP37.09■■■■□ 3.531e-7■■□□□ 14.1
HMG20B-216ENST00000585900 DNAJC5BQ9UF47 199 aa36.92■■■■□ 3.5
HMG20B-216ENST00000585900 BICRAQ9NZM4 1560 aa36.87■■■■□ 3.49
HMG20B-216ENST00000585900 SCRIBQ14160 1630 aa36.62■■■■□ 3.45
HMG20B-216ENST00000585900 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
HMG20B-216ENST00000585900 EIF4G1Q04637 1599 aaKnown RBP36■■■■□ 3.35
HMG20B-216ENST00000585900 CC2D2AQ9P2K1 1620 aa35.97■■■■□ 3.35
HMG20B-216ENST00000585900 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
HMG20B-216ENST00000585900 NCAPD3P42695 1498 aa34.96■■■■□ 3.19
HMG20B-216ENST00000585900 SMARCA4P51532 1647 aa34.95■■■■□ 3.19
HMG20B-216ENST00000585900 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
HMG20B-216ENST00000585900 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
HMG20B-216ENST00000585900 BAZ1AQ9NRL2 1556 aaPredicted RBP34.87■■■■□ 3.17
HMG20B-216ENST00000585900 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
HMG20B-216ENST00000585900 BAZ1BQ9UIG0 1483 aaKnown RBP34.63■■■■□ 3.13
HMG20B-216ENST00000585900 PEG3Q9GZU2 1588 aa34.62■■■■□ 3.13
HMG20B-216ENST00000585900 MROH2BQ7Z745 1585 aa34.57■■■■□ 3.12
HMG20B-216ENST00000585900 ERCC6Q03468 1493 aa34.44■■■■□ 3.1
HMG20B-216ENST00000585900 NESP48681 1621 aa34.26■■■■□ 3.07
HMG20B-216ENST00000585900 CUX2O14529 1486 aa34.23■■■■□ 3.07
HMG20B-216ENST00000585900 WIZO95785 1651 aa34.16■■■■□ 3.06
HMG20B-216ENST00000585900 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
HMG20B-216ENST00000585900 RSF1Q96T23 1441 aaPredicted RBP33.99■■■■□ 3.03
HMG20B-216ENST00000585900 PDS5BQ9NTI5 1447 aa33.96■■■■□ 3.03
HMG20B-216ENST00000585900 CADPSQ9ULU8 1353 aa33.93■■■■□ 3.02
HMG20B-216ENST00000585900 THOC2Q8NI27 1593 aaKnown RBP33.88■■■■□ 3.01
HMG20B-216ENST00000585900 KIF21AQ7Z4S6 1674 aa33.84■■■■□ 3.01
HMG20B-216ENST00000585900 TOP2AP11388 1531 aaKnown RBP33.83■■■■□ 3.01
HMG20B-216ENST00000585900 DNAJC5Q9H3Z4 198 aa33.74■■■□□ 2.99
HMG20B-216ENST00000585900 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
HMG20B-216ENST00000585900 CFTRP13569 1480 aa33.6■■■□□ 2.97
HMG20B-216ENST00000585900 CEP164Q9UPV0 1460 aa33.59■■■□□ 2.97
HMG20B-216ENST00000585900 FANCD2Q9BXW9 1451 aa33.56■■■□□ 2.96
HMG20B-216ENST00000585900 WDR62O43379 1518 aa33.53■■■□□ 2.96
HMG20B-216ENST00000585900 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
HMG20B-216ENST00000585900 PRDM2Q13029 1718 aa33.28■■■□□ 2.92
HMG20B-216ENST00000585900 URB2Q14146 1524 aaKnown RBP33.22■■■□□ 2.91
HMG20B-216ENST00000585900 ABCC8Q09428 1581 aa32.95■■■□□ 2.86
HMG20B-216ENST00000585900 TOPBP1Q92547 1522 aa32.94■■■□□ 2.86
HMG20B-216ENST00000585900 IFT140Q96RY7 1462 aa32.9■■■□□ 2.86
HMG20B-216ENST00000585900 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
HMG20B-216ENST00000585900 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
HMG20B-216ENST00000585900 ZNF608Q9ULD9 1512 aaPredicted RBP32.74■■■□□ 2.83
HMG20B-216ENST00000585900 OSCARQ8IYS5 282 aa32.7■■■□□ 2.83
HMG20B-216ENST00000585900 POLA1P09884 1462 aaPredicted RBP32.63■■■□□ 2.81
HMG20B-216ENST00000585900 EIF4G3O43432 1585 aaKnown RBP32.62■■■□□ 2.81
HMG20B-216ENST00000585900 TARBP1Q13395 1621 aaKnown RBP32.59■■■□□ 2.81
HMG20B-216ENST00000585900 AQRO60306 1485 aaKnown RBP eCLIP32.49■■■□□ 2.793e-7■■■■■ 33.1
HMG20B-216ENST00000585900 SOGA1O94964 1423 aa32.49■■■□□ 2.79
HMG20B-216ENST00000585900 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
HMG20B-216ENST00000585900 RAD54L2Q9Y4B4 1467 aa32.48■■■□□ 2.79
HMG20B-216ENST00000585900 CUX1P39880 1505 aa32.47■■■□□ 2.79
HMG20B-216ENST00000585900 TRIM41Q8WV44 630 aa32.45■■■□□ 2.79
HMG20B-216ENST00000585900 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
HMG20B-216ENST00000585900 TDRD9Q8NDG6 1382 aaKnown RBP32.36■■■□□ 2.77
HMG20B-216ENST00000585900 FBLN2P98095 1184 aa32.28■■■□□ 2.76
HMG20B-216ENST00000585900 CHD1O14646 1710 aa32.28■■■□□ 2.76
HMG20B-216ENST00000585900 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
HMG20B-216ENST00000585900 RIMBP3CA6NJZ7 1639 aa32.2■■■□□ 2.75
HMG20B-216ENST00000585900 RIMBP3BA6NNM3 1639 aa32.2■■■□□ 2.75
HMG20B-216ENST00000585900 RIMBP3Q9UFD9 1639 aa32.2■■■□□ 2.75
HMG20B-216ENST00000585900 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
HMG20B-216ENST00000585900 MAGI1Q96QZ7 1491 aaPredicted RBP32.17■■■□□ 2.74
HMG20B-216ENST00000585900 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
HMG20B-216ENST00000585900 ABCA10Q8WWZ4 1543 aa32.14■■■□□ 2.74
HMG20B-216ENST00000585900 WRNQ14191 1432 aaPredicted RBP eCLIP32.12■■■□□ 2.73
HMG20B-216ENST00000585900 GAPVD1Q14C86 1478 aa32.11■■■□□ 2.73
HMG20B-216ENST00000585900 CHMP7Q8WUX9 453 aaPredicted RBP32.1■■■□□ 2.73
HMG20B-216ENST00000585900 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
HMG20B-216ENST00000585900 BIVM-ERCC5R4GMW8 1640 aa32.06■■■□□ 2.72
HMG20B-216ENST00000585900 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
HMG20B-216ENST00000585900 SYNJ2O15056 1496 aa32.05■■■□□ 2.72
HMG20B-216ENST00000585900 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
HMG20B-216ENST00000585900 SYNJ1O43426 1573 aa32.02■■■□□ 2.72
HMG20B-216ENST00000585900 CLASP1Q7Z460 1538 aa31.94■■■□□ 2.7
HMG20B-216ENST00000585900 CYB5RLQ6IPT4 315 aa31.88■■■□□ 2.69
HMG20B-216ENST00000585900 ARAP1Q96P48 1450 aa31.85■■■□□ 2.69
HMG20B-216ENST00000585900 ADAMTS12P58397 1594 aa31.8■■■□□ 2.68
HMG20B-216ENST00000585900 GRIN2AQ12879 1464 aa31.77■■■□□ 2.68
HMG20B-216ENST00000585900 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
HMG20B-216ENST00000585900 FHAD1B1AJZ9 1412 aa31.74■■■□□ 2.67
HMG20B-216ENST00000585900 NUP160Q12769 1436 aa31.64■■■□□ 2.66
HMG20B-216ENST00000585900 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
HMG20B-216ENST00000585900 KIF27Q86VH2 1401 aa31.5■■■□□ 2.63
HMG20B-216ENST00000585900 TRHP20396 242 aaPredicted RBP31.47■■■□□ 2.63
HMG20B-216ENST00000585900 SHROOM2Q13796 1616 aa31.44■■■□□ 2.62
HMG20B-216ENST00000585900 ERCC6L2Q5T890 1561 aa31.41■■■□□ 2.62
HMG20B-216ENST00000585900 CUL7Q14999 1698 aa31.38■■■□□ 2.61
HMG20B-216ENST00000585900 IGF1RP08069 1367 aa31.37■■■□□ 2.61
HMG20B-216ENST00000585900 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms