RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 SCLT1Q96NL6 688 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 DNMBPQ6XZF7 1577 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
CDH8-211ENST00000584337 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 ARHGAP6O43182 974 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 RPS6KA5O75582 802 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 RUFY3Q7L099 469 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 ARMC2Q8NEN0 867 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 SNX14Q9Y5W7 946 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 NOS1P29475 1434 aa11.82□□□□□ -0.52
CDH8-211ENST00000584337 BIN1O00499 593 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 RNF40O75150 1001 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 CPA1P15085 419 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 PSME1Q06323 249 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 FRMD3A2A2Y4 597 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 TMCO5BA8MYB1 307 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 IQCA1Q86XH1 822 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 SSH2Q76I76 1423 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 REREQ9P2R6 1566 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 ABCC4O15439 1325 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 CUL7Q14999 1698 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 EPB41L2O43491 1005 aaKnown RBP11.81□□□□□ -0.52
CDH8-211ENST00000584337 GCFC2P16383 781 aaKnown RBP11.81□□□□□ -0.52
CDH8-211ENST00000584337 PEX19P40855 299 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 CASP8Q14790 479 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 TSPYL6Q8N831 410 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
CDH8-211ENST00000584337 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 STAG1Q8WVM7 1258 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 IRAK4Q9NWZ3 460 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
CDH8-211ENST00000584337 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 FCHSD2O94868 740 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 HMOX1P09601 288 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 GOLGA6DP0CG33 693 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 PIP4K2BP78356 416 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 SEMA3FQ13275 785 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 VPS53Q5VIR6 699 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 NBPF5PQ86XG9 351 aaPredicted RBP11.8□□□□□ -0.52
CDH8-211ENST00000584337 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 CCDC114Q96M63 670 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 MEIS3Q99687 375 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 GOLGA6AQ9NYA3 693 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 KCNJ6P48051 423 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 CCDC50Q8IVM0 306 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 CAGE1Q8TC20 777 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 MIEF2Q96C03 454 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 SYNMO15061 1565 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
CDH8-211ENST00000584337 GNAI3P08754 354 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 STK38Q15208 465 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 ABCB6Q9NP58 842 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.8□□□□□ -0.52
CDH8-211ENST00000584337 PPP2R2CQ9Y2T4 447 aa11.8□□□□□ -0.52
CDH8-211ENST00000584337 ATP2B2Q01814 1243 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 SCRN1Q12765 414 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 BAG1Q99933 345 aaPredicted RBP11.79□□□□□ -0.52
CDH8-211ENST00000584337 HOOK1Q9UJC3 728 aaKnown RBP11.79□□□□□ -0.52
CDH8-211ENST00000584337 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 FAM135BQ49AJ0 1406 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
CDH8-211ENST00000584337 CLSTN1O94985 981 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 IQCB1Q15051 598 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH8-211ENST00000584337 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
CDH8-211ENST00000584337 IPO7O95373 1038 aaKnown RBP11.79□□□□□ -0.52
CDH8-211ENST00000584337 FANCCQ00597 558 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 TUBB2AQ13885 445 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 TUBB2BQ9BVA1 445 aa11.79□□□□□ -0.52
CDH8-211ENST00000584337 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 CCDC175P0C221 793 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
CDH8-211ENST00000584337 NBPF9Q3BBW0 867 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 OSBPL3Q9H4L5 887 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDH8-211ENST00000584337 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
CDH8-211ENST00000584337 STIM1Q13586 685 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 DHX58Q96C10 678 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 CRYMQ14894 314 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 WWC2Q6AWC2 1192 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 KCND1Q9NSA2 647 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 PARP3Q9Y6F1 533 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 PLB1Q6P1J6 1458 aa11.78□□□□□ -0.52
CDH8-211ENST00000584337 N4BP1O75113 896 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms