RNA–Protein interactions for RNA: ENST00000584322.1

BRIP1-206, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 3

Gene BRIP1, Length 716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-206ENST00000584322 FANCIQ9NVI1 1328 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 KCNQ2O43526 872 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 NR1I2O75469 434 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
BRIP1-206ENST00000584322 LCE2DQ5TA82 110 aaPredicted RBP12.97□□□□□ -0.33
BRIP1-206ENST00000584322 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 USB1Q9BQ65 265 aaKnown RBP12.97□□□□□ -0.33
BRIP1-206ENST00000584322 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
BRIP1-206ENST00000584322 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
BRIP1-206ENST00000584322 ERBB4Q15303 1308 aa12.96□□□□□ -0.33
BRIP1-206ENST00000584322 TRIM37O94972 964 aa12.96□□□□□ -0.33
BRIP1-206ENST00000584322 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
BRIP1-206ENST00000584322 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.33
BRIP1-206ENST00000584322 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
BRIP1-206ENST00000584322 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
BRIP1-206ENST00000584322 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
BRIP1-206ENST00000584322 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
BRIP1-206ENST00000584322 BAG6P46379 1132 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 APLP1P51693 650 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 BRICD5Q6PL45 260 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 LYPD8Q6UX82 237 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
BRIP1-206ENST00000584322 QSER1Q2KHR3 1735 aa12.94□□□□□ -0.34
BRIP1-206ENST00000584322 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
BRIP1-206ENST00000584322 SIK1P57059 783 aa12.94□□□□□ -0.34
BRIP1-206ENST00000584322 NR6A1Q15406 480 aa12.94□□□□□ -0.34
BRIP1-206ENST00000584322 BLOC1S3Q6QNY0 202 aa12.94□□□□□ -0.34
BRIP1-206ENST00000584322 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
BRIP1-206ENST00000584322 GPR37L1O60883 481 aa12.93□□□□□ -0.34
BRIP1-206ENST00000584322 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
BRIP1-206ENST00000584322 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
BRIP1-206ENST00000584322 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
BRIP1-206ENST00000584322 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
BRIP1-206ENST00000584322 STARD3NLO95772 234 aa12.92□□□□□ -0.34
BRIP1-206ENST00000584322 APBA3O96018 575 aa12.92□□□□□ -0.34
BRIP1-206ENST00000584322 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
BRIP1-206ENST00000584322 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
BRIP1-206ENST00000584322 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
BRIP1-206ENST00000584322 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
BRIP1-206ENST00000584322 VAC14Q08AM6 782 aa12.91□□□□□ -0.34
BRIP1-206ENST00000584322 RC3H1Q5TC82 1133 aaKnown RBP12.91□□□□□ -0.34
BRIP1-206ENST00000584322 NUP188Q5SRE5 1749 aa12.91□□□□□ -0.34
BRIP1-206ENST00000584322 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
BRIP1-206ENST00000584322 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
BRIP1-206ENST00000584322 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
BRIP1-206ENST00000584322 THAP11Q96EK4 314 aa12.9□□□□□ -0.34
BRIP1-206ENST00000584322 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
BRIP1-206ENST00000584322 MIS18AQ9NYP9 233 aa12.9□□□□□ -0.34
BRIP1-206ENST00000584322 UBR3Q6ZT12 1888 aa12.9□□□□□ -0.34
BRIP1-206ENST00000584322 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
BRIP1-206ENST00000584322 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
BRIP1-206ENST00000584322 CCDC30Q5VVM6 783 aa12.89□□□□□ -0.35
BRIP1-206ENST00000584322 PTF1AQ7RTS3 328 aa12.89□□□□□ -0.35
BRIP1-206ENST00000584322 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
BRIP1-206ENST00000584322 KCNQ3O43525 872 aa12.88□□□□□ -0.35
BRIP1-206ENST00000584322 VAMP4O75379 141 aa12.88□□□□□ -0.35
BRIP1-206ENST00000584322 SOX11P35716 441 aa12.88□□□□□ -0.35
BRIP1-206ENST00000584322 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
BRIP1-206ENST00000584322 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
BRIP1-206ENST00000584322 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
BRIP1-206ENST00000584322 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
BRIP1-206ENST00000584322 JUNDP17535 347 aa12.87□□□□□ -0.35
BRIP1-206ENST00000584322 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
BRIP1-206ENST00000584322 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
BRIP1-206ENST00000584322 DBF4Q9UBU7 674 aaPredicted RBP12.87□□□□□ -0.35
BRIP1-206ENST00000584322 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
BRIP1-206ENST00000584322 ILDR2Q71H61 639 aa12.86□□□□□ -0.35
BRIP1-206ENST00000584322 STK31Q9BXU1 1019 aa12.86□□□□□ -0.35
BRIP1-206ENST00000584322 ALG2Q9H553 416 aa12.86□□□□□ -0.35
BRIP1-206ENST00000584322 DDX21Q9NR30 783 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRIP1-206ENST00000584322 ITPK1Q13572 414 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 PTPRNQ16849 979 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 ADAMTS19Q8TE59 1207 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 CCDC87Q9NVE4 849 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
BRIP1-206ENST00000584322 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 CRKLP46109 303 aaKnown RBP12.84□□□□□ -0.35
BRIP1-206ENST00000584322 SEMA3FQ13275 785 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 TSPYL6Q8N831 410 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 LRRC4BQ9NT99 713 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
BRIP1-206ENST00000584322 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
BRIP1-206ENST00000584322 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.35
BRIP1-206ENST00000584322 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
BRIP1-206ENST00000584322 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 A0A087WZG4 1122 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 SSFA2P28290 1259 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 LINC00116Q8NCU8 138 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms