RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 RCAN3Q9UKA8 241 aa10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
SUPT4H1-206ENST00000581204 IL16Q14005 1332 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 FER1L6Q2WGJ9 1857 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 AFDNP55196 1824 aaKnown RBP10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 A6NJR5 290 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 LDHDQ86WU2 507 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 HOMEZQ8IX15 550 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 TRMT2AQ8IZ69 625 aaKnown RBP10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 RDH13Q8NBN7 331 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 BANK1Q8NDB2 785 aa10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 THUMPD2Q9BTF0 503 aaKnown RBP10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 SRP68Q9UHB9 627 aaKnown RBP10.87□□□□□ -0.67
SUPT4H1-206ENST00000581204 USP42Q9H9J4 1324 aaKnown RBP10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 GNAT3A8MTJ3 354 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 SPTLC1O15269 473 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 RPS6KA4O75676 772 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 DDNO94850 711 aaPredicted RBP10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 RFC4P35249 363 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 DEFB115Q30KQ5 88 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 AMOTQ4VCS5 1084 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 TMEM259Q4ZIN3 620 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 SCN4AP35499 1836 aa10.86□□□□□ -0.67
SUPT4H1-206ENST00000581204 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 TM4SF1P30408 202 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 GNAI1P63096 354 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 DCTN1Q14203 1278 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 C1orf141Q5JVX7 400 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 PPP2R2DQ66LE6 453 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 LHX8Q68G74 356 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 ZNF530Q6P9A1 599 aaPredicted RBP10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 MCM10Q7L590 875 aa10.85□□□□□ -0.67
SUPT4H1-206ENST00000581204 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 SMAPO00193 183 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 EMP3P54852 163 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 TSR2Q969E8 191 aaKnown RBP10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 TAF1DQ9H5J8 278 aaPredicted RBP10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 IFT57Q9NWB7 429 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
SUPT4H1-206ENST00000581204 CARMIL3Q8ND23 1372 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 APBB1O00213 710 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 RAD21O60216 631 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 KDM4AO75164 1064 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 RFC5P40937 340 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 PSEN2P49810 448 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 ERFEQ4G0M1 354 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 LAPTM4BQ86VI4 370 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 TJP1Q07157 1748 aa10.83□□□□□ -0.68
SUPT4H1-206ENST00000581204 COL11A2P13942 1736 aaPredicted RBP10.82□□□□□ -0.68
SUPT4H1-206ENST00000581204 AKAP4Q5JQC9 854 aa10.82□□□□□ -0.68
SUPT4H1-206ENST00000581204 TTLL6Q8N841 843 aa10.82□□□□□ -0.68
SUPT4H1-206ENST00000581204 LIMD1Q9UGP4 676 aa10.82□□□□□ -0.68
SUPT4H1-206ENST00000581204 EXOSC9Q06265 439 aaKnown RBP10.81□□□□□ -0.68
SUPT4H1-206ENST00000581204 SLF2Q8IX21 1173 aa10.81□□□□□ -0.68
SUPT4H1-206ENST00000581204 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
SUPT4H1-206ENST00000581204 NECTIN2Q92692 538 aa10.81□□□□□ -0.68
SUPT4H1-206ENST00000581204 LTBP3Q9NS15 1303 aa10.81□□□□□ -0.68
SUPT4H1-206ENST00000581204 ANKRD31Q8N7Z5 1873 aa10.81□□□□□ -0.68
SUPT4H1-206ENST00000581204 CASP8AP2Q9UKL3 1982 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 IQCA1LA6NCM1 817 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 CT47B1P0C2W7 299 aaPredicted RBP10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 GCGRP47871 477 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 RRP1P56182 461 aaKnown RBP10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 SOX10P56693 466 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 IRX6P78412 446 aaPredicted RBP10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 CAPNS2Q96L46 248 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
SUPT4H1-206ENST00000581204 ST18O60284 1047 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 PHKG2P15735 406 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 TEFQ10587 303 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 DGKZQ13574 1117 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 CYP4F22Q6NT55 531 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 IFNL2Q8IZJ0 200 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 IL17REQ8NFR9 667 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
SUPT4H1-206ENST00000581204 MOXD2PA6NHM9 499 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 TK2O00142 265 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 CHL1O00533 1208 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 CANXP27824 592 aaKnown RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 CRKLP46109 303 aaKnown RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 NFIXQ14938 502 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 TAF7Q15545 349 aaPredicted RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 GRIPAP1Q4V328 841 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 MAP1SQ66K74 1059 aaPredicted RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 CNTROBQ8N137 903 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 GPR101Q96P66 508 aaPredicted RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 PRM3Q9NNZ6 103 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 ABT1Q9ULW3 272 aaKnown RBP10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
SUPT4H1-206ENST00000581204 RNF123Q5XPI4 1314 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms