RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 RBM25P49756 843 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-217ENST00000580287 MSL1Q68DK7 614 aa15.43■□□□□ 0.06
CDK5RAP3-217ENST00000580287 TPTE2Q6XPS3 522 aa15.43■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CEP126Q9P2H0 1117 aa15.43■□□□□ 0.06
CDK5RAP3-217ENST00000580287 TAF5LO75529 589 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 ADRA2BP18089 450 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 ADORA1P30542 326 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CCDC152Q4G0S7 254 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 UBE2Q2Q8WVN8 375 aa15.42■□□□□ 0.06
CDK5RAP3-217ENST00000580287 PDGFDQ9GZP0 370 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CIAO1O76071 339 aa15.41■□□□□ 0.06
CDK5RAP3-217ENST00000580287 DDR1Q08345 913 aa15.41■□□□□ 0.06
CDK5RAP3-217ENST00000580287 IL25Q9H293 177 aa15.41■□□□□ 0.06
CDK5RAP3-217ENST00000580287 COL4A1P02462 1669 aa15.41■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CASC1Q6TDU7 716 aa15.4■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CELF1Q92879 486 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-217ENST00000580287 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
CDK5RAP3-217ENST00000580287 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CHGBP05060 677 aa15.4■□□□□ 0.06
CDK5RAP3-217ENST00000580287 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
CDK5RAP3-217ENST00000580287 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 NLRP3Q96P20 1036 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 NYXQ9GZU5 481 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 TTC41PQ6P2S7 1318 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SERPINB2P05120 415 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 TM4SF1P30408 202 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
CDK5RAP3-217ENST00000580287 C4AP0C0L4 1744 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 GPATCH3Q96I76 525 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 DNAJC2Q99543 621 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 ERC2O15083 957 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 KIF2CQ99661 725 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SCN7AQ01118 1682 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 CARMIL3Q8ND23 1372 aa15.38■□□□□ 0.05
CDK5RAP3-217ENST00000580287 CHMLP26374 656 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SF3B3Q15393 1217 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 VGLL2Q8N8G2 317 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 XAGE2Q96GT9 111 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 RIC1Q4ADV7 1423 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 AOX1Q06278 1338 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 UTRNP46939 3433 aa15.37■□□□□ 0.05
CDK5RAP3-217ENST00000580287 PDE8BO95263 885 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 IGHMBP2P38935 993 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 PI16Q6UXB8 463 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 FAM43AQ8N2R8 423 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 RGL2O15211 777 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SCARF1Q14162 830 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
CDK5RAP3-217ENST00000580287 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 SLC15A2Q16348 729 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 GORABQ5T7V8 394 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 CWC27Q6UX04 472 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 DDX46Q7L014 1031 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 ATP5JP18859 108 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 CHRNDQ07001 517 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 ANKRD18AQ8IVF6 992 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 TAF1P21675 1872 aa15.35■□□□□ 0.05
CDK5RAP3-217ENST00000580287 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-217ENST00000580287 MMP10P09238 476 aa15.34■□□□□ 0.05
CDK5RAP3-217ENST00000580287 HSP90B1P14625 803 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-217ENST00000580287 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
CDK5RAP3-217ENST00000580287 ZNF609O15014 1411 aa15.34■□□□□ 0.05
CDK5RAP3-217ENST00000580287 IGSF3O75054 1194 aa15.33■□□□□ 0.05
CDK5RAP3-217ENST00000580287 MCM4P33991 863 aa15.33■□□□□ 0.05
CDK5RAP3-217ENST00000580287 BAG6P46379 1132 aa15.33■□□□□ 0.05
CDK5RAP3-217ENST00000580287 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.05
CDK5RAP3-217ENST00000580287 CDC5LQ99459 802 aaKnown RBP15.33■□□□□ 0.05
CDK5RAP3-217ENST00000580287 AKAP2Q9Y2D5 859 aa15.33■□□□□ 0.05
CDK5RAP3-217ENST00000580287 GOLIM4O00461 696 aa15.33■□□□□ 0.04
CDK5RAP3-217ENST00000580287 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-217ENST00000580287 FAM227BQ96M60 508 aa15.33■□□□□ 0.04
CDK5RAP3-217ENST00000580287 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.04
CDK5RAP3-217ENST00000580287 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
CDK5RAP3-217ENST00000580287 SNX21Q969T3 373 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 MINPP1Q9UNW1 487 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 MYH3P11055 1940 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 PHKA1P46020 1223 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 PDE4CQ08493 712 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 EVI5LQ96CN4 794 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 FSD1Q9BTV5 496 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 USP26Q9BXU7 913 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 MROH5Q6ZUA9 1318 aa15.32■□□□□ 0.04
CDK5RAP3-217ENST00000580287 TTC39AQ5SRH9 613 aa15.31■□□□□ 0.04
CDK5RAP3-217ENST00000580287 IQSEC3Q9UPP2 1182 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-217ENST00000580287 REC8O95072 547 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms