RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 RIMBP2O15034 1052 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 SOX10P56693 466 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 PKN2Q16513 984 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 KIF4BQ2VIQ3 1234 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 POLLQ9UGP5 575 aa15.96■□□□□ 0.15
CDK5RAP3-216ENST00000579853 G3V3G9 751 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 EGFRP00533 1210 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 VIL1P09327 827 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DLK2Q6UY11 383 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CELF1Q92879 486 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 GGA3Q9NZ52 723 aa15.95■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 GPSM2P81274 684 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ANKRD13DQ6ZTN6 518 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 AGBL3Q8NEM8 1001 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 TBC1D16Q8TBP0 767 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RTL9Q8NET4 1388 aa15.94■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HOXB7P09629 217 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DOK7Q18PE1 504 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CDCA5Q96FF9 252 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ZNF609O15014 1411 aa15.93■□□□□ 0.14
CDK5RAP3-216ENST00000579853 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-216ENST00000579853 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PITPNM2Q9BZ72 1349 aa15.92■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 DBF4Q9UBU7 674 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HDAC9Q9UKV0 1011 aa15.91■□□□□ 0.14
CDK5RAP3-216ENST00000579853 CHL1O00533 1208 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 SCARF1Q14162 830 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 ANGEL2Q5VTE6 544 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 RSBN1LQ6PCB5 846 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 GGA1Q9UJY5 639 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 HPS5Q9UPZ3 1129 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 MKI67P46013 3256 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
CDK5RAP3-216ENST00000579853 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 UFL1O94874 794 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 HTTP42858 3142 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 CENPFP49454 3210 aa15.89■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ATP5J2-PTCD1G3V325 749 aa15.88■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L8P0C7I0 530 aa15.88■□□□□ 0.13
CDK5RAP3-216ENST00000579853 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
CDK5RAP3-216ENST00000579853 PODNQ7Z5L7 613 aa15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ZBTB38Q8NAP3 1195 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ZNF296Q8WUU4 475 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GCC1Q96CN9 775 aa15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ASTN2O75129 1339 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-216ENST00000579853 NF2P35240 595 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 MMP14P50281 582 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 CCDC152Q4G0S7 254 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 ZNF428Q96B54 188 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 PSME4Q14997 1843 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 XDHP47989 1333 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 CEP290O15078 2479 aa15.86■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 TM4SF4P48230 202 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 SREBF2Q12772 1141 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 FBXO46Q6PJ61 603 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GMLQ99445 158 aa15.85■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 KRT24Q2M2I5 525 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 OGFOD1Q8N543 542 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 SEC31BQ9NQW1 1179 aa15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-216ENST00000579853 GPR25O00155 361 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 PDE8AO60658 829 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 ATP2B4P23634 1241 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 RALBP1Q15311 655 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CFHR5Q9BXR6 569 aa15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 KIAA0100Q14667 2235 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-216ENST00000579853 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 PCCAP05165 728 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 ANKRD18AQ8IVF6 992 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
CDK5RAP3-216ENST00000579853 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms