RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 VIL1P09327 827 aaKnown RBP21.39■■□□□ 1.01
CTDNEP1-211ENST00000575783 MOB2Q70IA6 237 aa21.39■■□□□ 1.01
CTDNEP1-211ENST00000575783 TBC1D16Q8TBP0 767 aa21.39■■□□□ 1.01
CTDNEP1-211ENST00000575783 GCC1Q96CN9 775 aa21.39■■□□□ 1.01
CTDNEP1-211ENST00000575783 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
CTDNEP1-211ENST00000575783 ZC3H12CQ9C0D7 883 aaKnown RBP21.39■■□□□ 1.01
CTDNEP1-211ENST00000575783 FAM89AQ96GI7 184 aa21.38■■□□□ 1.01
CTDNEP1-211ENST00000575783 UBE2Q2LH0YL09 131 aa21.37■■□□□ 1.01
CTDNEP1-211ENST00000575783 FKBP1BP68106 108 aa21.37■■□□□ 1.01
CTDNEP1-211ENST00000575783 RTL5Q5HYW3 569 aaPredicted RBP21.37■■□□□ 1.01
CTDNEP1-211ENST00000575783 SCAF8Q9UPN6 1271 aaKnown RBP21.37■■□□□ 1.01
CTDNEP1-211ENST00000575783 SF3B3Q15393 1217 aaKnown RBP21.36■■□□□ 1.01
CTDNEP1-211ENST00000575783 MAPK8IP3Q9UPT6 1336 aa21.35■■□□□ 1.01
CTDNEP1-211ENST00000575783 GPR25O00155 361 aa21.35■■□□□ 1.01
CTDNEP1-211ENST00000575783 FBXO46Q6PJ61 603 aaPredicted RBP21.35■■□□□ 1.01
CTDNEP1-211ENST00000575783 AKAP11Q9UKA4 1901 aa21.35■■□□□ 1.01
CTDNEP1-211ENST00000575783 POLR2AP24928 1970 aaKnown RBP21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 ZNF280AP59817 542 aaPredicted RBP21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 MKRN3Q13064 507 aaKnown RBP21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 TTLL12Q14166 644 aaPredicted RBP21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 PRAMEF18Q5VWM3 479 aa21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 MKI67P46013 3256 aaKnown RBP21.34■■□□□ 1.01
CTDNEP1-211ENST00000575783 LAMB2P55268 1798 aa21.33■■□□□ 1.01
CTDNEP1-211ENST00000575783 TAF1P21675 1872 aa21.33■■□□□ 1.01
CTDNEP1-211ENST00000575783 ATP5J2-PTCD1G3V325 749 aa21.33■■□□□ 1.01
CTDNEP1-211ENST00000575783 HABP4Q5JVS0 413 aaKnown RBP21.33■■□□□ 1.01
CTDNEP1-211ENST00000575783 RSBN1LQ6PCB5 846 aaPredicted RBP21.33■■□□□ 1.01
CTDNEP1-211ENST00000575783 ANKIB1Q9P2G1 1089 aa21.33■■□□□ 1.01
CTDNEP1-211ENST00000575783 ANKRD36CQ5JPF3 1778 aa21.33■■□□□ 1
CTDNEP1-211ENST00000575783 UFL1O94874 794 aa21.32■■□□□ 1
CTDNEP1-211ENST00000575783 TM4SF4P48230 202 aa21.32■■□□□ 1
CTDNEP1-211ENST00000575783 AGBL3Q8NEM8 1001 aa21.32■■□□□ 1
CTDNEP1-211ENST00000575783 MYOZ2Q9NPC6 264 aa21.32■■□□□ 1
CTDNEP1-211ENST00000575783 USP17L8P0C7I0 530 aa21.31■■□□□ 1
CTDNEP1-211ENST00000575783 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
CTDNEP1-211ENST00000575783 FKTNO75072 461 aa21.3■■□□□ 1
CTDNEP1-211ENST00000575783 RIPK4P57078 832 aa21.3■■□□□ 1
CTDNEP1-211ENST00000575783 GGA1Q9UJY5 639 aa21.3■■□□□ 1
CTDNEP1-211ENST00000575783 IRS4O14654 1257 aaPredicted RBP21.29■■□□□ 1
CTDNEP1-211ENST00000575783 ANKRD13DQ6ZTN6 518 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 PLBD2Q8NHP8 589 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 R3HDMLQ9H3Y0 253 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 CHPF2Q9P2E5 772 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 LRRC37AA6NMS7 1700 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 PITPNM2Q9BZ72 1349 aa21.29■■□□□ 1
CTDNEP1-211ENST00000575783 KRT24Q2M2I5 525 aa21.28■■□□□ 1
CTDNEP1-211ENST00000575783 NOM1Q5C9Z4 860 aaKnown RBP21.28■■□□□ 1
CTDNEP1-211ENST00000575783 SEC31BQ9NQW1 1179 aa21.28■■□□□ 1
CTDNEP1-211ENST00000575783 BABAM1Q9NWV8 329 aa21.28■■□□□ 1
CTDNEP1-211ENST00000575783 DLG5Q8TDM6 1919 aa21.27■■□□□ 1
CTDNEP1-211ENST00000575783 SREBF2Q12772 1141 aa21.27■■□□□ 1
CTDNEP1-211ENST00000575783 NBPF9Q3BBW0 867 aa21.27■■□□□ 1
CTDNEP1-211ENST00000575783 GMLQ99445 158 aa21.27■■□□□ 1
CTDNEP1-211ENST00000575783 COL4A1P02462 1669 aa21.26■□□□□ 0.99
CTDNEP1-211ENST00000575783 PAPPA2Q9BXP8 1791 aa21.25■□□□□ 0.99
CTDNEP1-211ENST00000575783 USP17L3A6NCW0 530 aa21.25■□□□□ 0.99
CTDNEP1-211ENST00000575783 USP17L4A6NCW7 530 aa21.25■□□□□ 0.99
CTDNEP1-211ENST00000575783 NF2P35240 595 aa21.25■□□□□ 0.99
CTDNEP1-211ENST00000575783 PRKG1Q13976 671 aa21.25■□□□□ 0.99
CTDNEP1-211ENST00000575783 USP17L1Q7RTZ2 530 aa21.25■□□□□ 0.99
CTDNEP1-211ENST00000575783 POTEFA5A3E0 1075 aa21.24■□□□□ 0.99
CTDNEP1-211ENST00000575783 PTPN12Q05209 780 aaKnown RBP21.24■□□□□ 0.99
CTDNEP1-211ENST00000575783 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.24■□□□□ 0.99
CTDNEP1-211ENST00000575783 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
CTDNEP1-211ENST00000575783 HTTP42858 3142 aa21.24■□□□□ 0.99
CTDNEP1-211ENST00000575783 CENPFP49454 3210 aa21.23■□□□□ 0.99
CTDNEP1-211ENST00000575783 HDGFL1Q5TGJ6 251 aa21.23■□□□□ 0.99
CTDNEP1-211ENST00000575783 TRIM17Q9Y577 477 aa21.23■□□□□ 0.99
CTDNEP1-211ENST00000575783 CCDC85AQ96PX6 553 aaPredicted RBP21.22■□□□□ 0.99
CTDNEP1-211ENST00000575783 MXD3Q9BW11 206 aa21.22■□□□□ 0.99
CTDNEP1-211ENST00000575783 SCN9AQ15858 1988 aa21.22■□□□□ 0.99
CTDNEP1-211ENST00000575783 INTS3Q68E01 1043 aaKnown RBP21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 PODNQ7Z5L7 613 aa21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 OGFOD1Q8N543 542 aa21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 FBXW7Q969H0 707 aa21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 CFHR5Q9BXR6 569 aa21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 DDX60Q8IY21 1712 aaKnown RBP21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 ZNF609O15014 1411 aa21.21■□□□□ 0.99
CTDNEP1-211ENST00000575783 LMOD3Q0VAK6 560 aa21.2■□□□□ 0.98
CTDNEP1-211ENST00000575783 TRIM28Q13263 835 aaKnown RBP21.2■□□□□ 0.98
CTDNEP1-211ENST00000575783 ZBTB38Q8NAP3 1195 aaPredicted RBP21.2■□□□□ 0.98
CTDNEP1-211ENST00000575783 WTIPA6NIX2 430 aaPredicted RBP21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 WNT10BO00744 389 aa21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 ALDH1A1P00352 501 aa21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 TMPOP42166 694 aaKnown RBP21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 CCDC152Q4G0S7 254 aa21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 SPRYD7Q5W111 196 aa21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 XDHP47989 1333 aa21.19■□□□□ 0.98
CTDNEP1-211ENST00000575783 CHL1O00533 1208 aa21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 SASH1O94885 1247 aa21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 HSP90B1P14625 803 aaKnown RBP21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 ATP2B4P23634 1241 aa21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 FXR1P51114 621 aaKnown RBP eCLIP21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 OTOP1Q7RTM1 612 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms