RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
SMG6-219ENST00000575663 U2AF1Q01081 240 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-219ENST00000575663 MKRN3Q13064 507 aaKnown RBP7.78□□□□□ -1.16
SMG6-219ENST00000575663 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 MOB2Q70IA6 237 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 ARMC9Q7Z3E5 817 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 ERO1AQ96HE7 468 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 TMEM106CQ9BVX2 250 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
SMG6-219ENST00000575663 MYOZ2Q9NPC6 264 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 MIS18AQ9NYP9 233 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 NUP98P52948 1817 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 LRRC37AA6NMS7 1700 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 BRCA2P51587 3418 aa7.77□□□□□ -1.17
SMG6-219ENST00000575663 MANSC4A6NHS7 340 aaPredicted RBP7.77□□□□□ -1.17
SMG6-219ENST00000575663 USP17L8P0C7I0 530 aa7.77□□□□□ -1.17
SMG6-219ENST00000575663 CNGB1Q14028 1251 aaPredicted RBP7.77□□□□□ -1.17
SMG6-219ENST00000575663 RSBN1LQ6PCB5 846 aaPredicted RBP7.77□□□□□ -1.17
SMG6-219ENST00000575663 NLRP10Q86W26 655 aa7.77□□□□□ -1.17
SMG6-219ENST00000575663 ARMC5Q96C12 935 aa7.77□□□□□ -1.17
SMG6-219ENST00000575663 POLLQ9UGP5 575 aa7.77□□□□□ -1.17
SMG6-219ENST00000575663 CLSPNQ9HAW4 1339 aa7.77□□□□□ -1.17
SMG6-219ENST00000575663 HTTP42858 3142 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 PER1O15534 1290 aaPredicted RBP7.76□□□□□ -1.17
SMG6-219ENST00000575663 UFL1O94874 794 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 EN2P19622 333 aaPredicted RBP7.76□□□□□ -1.17
SMG6-219ENST00000575663 INHBEP58166 350 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 GPSM2P81274 684 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 ERICH6Q7L0X2 663 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 TBC1D16Q8TBP0 767 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 CELF1Q92879 486 aaKnown RBP7.76□□□□□ -1.17
SMG6-219ENST00000575663 KCNQ5Q9NR82 932 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 PTPN22Q9Y2R2 807 aa7.76□□□□□ -1.17
SMG6-219ENST00000575663 ANKRD36CQ5JPF3 1778 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 ZBTB48P10074 688 aaPredicted RBP7.75□□□□□ -1.17
SMG6-219ENST00000575663 SPRYD7Q5W111 196 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 OTUD7BQ6GQQ9 843 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 CHRDL2Q6WN34 429 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 NBPF11Q86T75 865 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 IFNL1Q8IU54 200 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 OGFOD1Q8N543 542 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 THUMPD2Q9BTF0 503 aaKnown RBP7.75□□□□□ -1.17
SMG6-219ENST00000575663 EFCC1Q9HA90 598 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 PODXL2Q9NZ53 605 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 ANKIB1Q9P2G1 1089 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 GGA1Q9UJY5 639 aa7.75□□□□□ -1.17
SMG6-219ENST00000575663 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 USP17L3A6NCW0 530 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 USP17L4A6NCW7 530 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 EIF2S2P20042 333 aaKnown RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 AIMP1Q12904 312 aaKnown RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 ARHGEF6Q15052 776 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 SF3B3Q15393 1217 aaKnown RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 SLC4A8Q2Y0W8 1093 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 SLC9C1Q4G0N8 1177 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 PRAMEF18Q5VWM3 479 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 USP17L1Q7RTZ2 530 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 LRP10Q7Z4F1 713 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 APOBEC3FQ8IUX4 373 aaKnown RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 CD99L2Q8TCZ2 262 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 ZNF333Q96JL9 665 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 R3HDMLQ9H3Y0 253 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 DAXXQ9UER7 740 aaPredicted RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 TSPYL4Q9UJ04 414 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 SCAF8Q9UPN6 1271 aaKnown RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 MYO3BQ8WXR4 1341 aa7.74□□□□□ -1.17
SMG6-219ENST00000575663 COL1A1P02452 1464 aaPredicted RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 RBBP6Q7Z6E9 1792 aaKnown RBP7.74□□□□□ -1.17
SMG6-219ENST00000575663 H0YGN5 161 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
SMG6-219ENST00000575663 RPS8P62241 208 aaKnown RBP7.73□□□□□ -1.17
SMG6-219ENST00000575663 SP3Q02447 781 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 PTPN12Q05209 780 aaKnown RBP7.73□□□□□ -1.17
SMG6-219ENST00000575663 PRKG1Q13976 671 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 PDIA6Q15084 440 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 COPS6Q7L5N1 327 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 PODNQ7Z5L7 613 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 XAGE3Q8WTP9 111 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 OTUD5Q96G74 571 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 ANGEL1Q9UNK9 670 aaKnown RBP7.73□□□□□ -1.17
SMG6-219ENST00000575663 CENPFP49454 3210 aa7.73□□□□□ -1.17
SMG6-219ENST00000575663 SZT2Q5T011 3432 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 LAMB2P55268 1798 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 WNT10BO00744 389 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 ANXA1P04083 346 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 MMP14P50281 582 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 TRIM26Q12899 539 aaPredicted RBP7.72□□□□□ -1.17
SMG6-219ENST00000575663 PROSER3Q2NL68 480 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 NBPF9Q3BBW0 867 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 SLC10A4Q96EP9 437 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 FAM89AQ96GI7 184 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 GMLQ99445 158 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 XDHP47989 1333 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 MAPK8IP3Q9UPT6 1336 aa7.72□□□□□ -1.17
SMG6-219ENST00000575663 UNCXA6NJT0 531 aa7.71□□□□□ -1.18
SMG6-219ENST00000575663 IGF2BP3O00425 579 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMG6-219ENST00000575663 IRS4O14654 1257 aaPredicted RBP7.71□□□□□ -1.18
SMG6-219ENST00000575663 PPP1R12BO60237 982 aaPredicted RBP7.71□□□□□ -1.18
SMG6-219ENST00000575663 MNX1P50219 401 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms