RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
NDC80-204ENST00000575515 FBXO46Q6PJ61 603 aaPredicted RBP13□□□□□ -0.33
NDC80-204ENST00000575515 TMC4Q7Z404 712 aa13□□□□□ -0.33
NDC80-204ENST00000575515 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
NDC80-204ENST00000575515 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
NDC80-204ENST00000575515 ASTN2O75129 1339 aaPredicted RBP12.99□□□□□ -0.33
NDC80-204ENST00000575515 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
NDC80-204ENST00000575515 NEFMP07197 916 aa12.99□□□□□ -0.33
NDC80-204ENST00000575515 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
NDC80-204ENST00000575515 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
NDC80-204ENST00000575515 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
NDC80-204ENST00000575515 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
NDC80-204ENST00000575515 EYA3Q99504 573 aa12.98□□□□□ -0.33
NDC80-204ENST00000575515 KCNQ5Q9NR82 932 aa12.98□□□□□ -0.33
NDC80-204ENST00000575515 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
NDC80-204ENST00000575515 G3V3G9 751 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 GPR25O00155 361 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
NDC80-204ENST00000575515 FKBP1BP68106 108 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 TTLL12Q14166 644 aaPredicted RBP12.97□□□□□ -0.33
NDC80-204ENST00000575515 HSP90AB3PQ58FF7 597 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
NDC80-204ENST00000575515 ANXA1P04083 346 aa12.96□□□□□ -0.33
NDC80-204ENST00000575515 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.33
NDC80-204ENST00000575515 FKTNO75072 461 aa12.95□□□□□ -0.34
NDC80-204ENST00000575515 GPSM2P81274 684 aa12.95□□□□□ -0.34
NDC80-204ENST00000575515 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
NDC80-204ENST00000575515 SCARF1Q14162 830 aa12.95□□□□□ -0.34
NDC80-204ENST00000575515 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
NDC80-204ENST00000575515 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
NDC80-204ENST00000575515 COL4A1P02462 1669 aa12.95□□□□□ -0.34
NDC80-204ENST00000575515 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
NDC80-204ENST00000575515 UBE2Q2LH0YL09 131 aa12.94□□□□□ -0.34
NDC80-204ENST00000575515 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
NDC80-204ENST00000575515 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
NDC80-204ENST00000575515 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
NDC80-204ENST00000575515 NEFLP07196 543 aa12.93□□□□□ -0.34
NDC80-204ENST00000575515 VIL1P09327 827 aaKnown RBP12.93□□□□□ -0.34
NDC80-204ENST00000575515 SREBF2Q12772 1141 aa12.93□□□□□ -0.34
NDC80-204ENST00000575515 NOM1Q5C9Z4 860 aaKnown RBP12.93□□□□□ -0.34
NDC80-204ENST00000575515 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
NDC80-204ENST00000575515 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
NDC80-204ENST00000575515 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
NDC80-204ENST00000575515 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
NDC80-204ENST00000575515 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 PITPNM2Q9BZ72 1349 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 NF2P35240 595 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 TM4SF4P48230 202 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
NDC80-204ENST00000575515 TCIRG1Q13488 830 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 PDIA6Q15084 440 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 TBC1D16Q8TBP0 767 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
NDC80-204ENST00000575515 ZNF609O15014 1411 aa12.91□□□□□ -0.34
NDC80-204ENST00000575515 UFL1O94874 794 aa12.91□□□□□ -0.34
NDC80-204ENST00000575515 ZNF280AP59817 542 aaPredicted RBP12.91□□□□□ -0.34
NDC80-204ENST00000575515 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
NDC80-204ENST00000575515 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
NDC80-204ENST00000575515 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
NDC80-204ENST00000575515 MYOZ2Q9NPC6 264 aa12.91□□□□□ -0.34
NDC80-204ENST00000575515 TRIM17Q9Y577 477 aa12.91□□□□□ -0.34
NDC80-204ENST00000575515 LAMB1P07942 1786 aa12.9□□□□□ -0.34
NDC80-204ENST00000575515 USP17L8P0C7I0 530 aa12.9□□□□□ -0.34
NDC80-204ENST00000575515 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
NDC80-204ENST00000575515 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
NDC80-204ENST00000575515 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
NDC80-204ENST00000575515 ANKIB1Q9P2G1 1089 aa12.9□□□□□ -0.34
NDC80-204ENST00000575515 ADAMTS8Q9UP79 889 aa12.9□□□□□ -0.34
NDC80-204ENST00000575515 SF3B3Q15393 1217 aaKnown RBP12.89□□□□□ -0.35
NDC80-204ENST00000575515 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
NDC80-204ENST00000575515 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
NDC80-204ENST00000575515 ZNF646O15015 1829 aaPredicted RBP12.89□□□□□ -0.35
NDC80-204ENST00000575515 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
NDC80-204ENST00000575515 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
NDC80-204ENST00000575515 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
NDC80-204ENST00000575515 PRKG1Q13976 671 aa12.88□□□□□ -0.35
NDC80-204ENST00000575515 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
NDC80-204ENST00000575515 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
NDC80-204ENST00000575515 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
NDC80-204ENST00000575515 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
NDC80-204ENST00000575515 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
NDC80-204ENST00000575515 NBPF9Q3BBW0 867 aa12.87□□□□□ -0.35
NDC80-204ENST00000575515 OTOP1Q7RTM1 612 aa12.87□□□□□ -0.35
NDC80-204ENST00000575515 ARMC9Q7Z3E5 817 aa12.87□□□□□ -0.35
NDC80-204ENST00000575515 SALL2Q9Y467 1007 aaPredicted RBP12.87□□□□□ -0.35
NDC80-204ENST00000575515 MYH3P11055 1940 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 ATP5J2-PTCD1G3V325 749 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 PTPN12Q05209 780 aaKnown RBP12.86□□□□□ -0.35
NDC80-204ENST00000575515 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
NDC80-204ENST00000575515 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
NDC80-204ENST00000575515 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
NDC80-204ENST00000575515 IRS4O14654 1257 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms