RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 TAF1P21675 1872 aa12.27□□□□□ -0.45
NPLOC4-210ENST00000572824 POTECB2RU33 542 aa12.26□□□□□ -0.45
NPLOC4-210ENST00000572824 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-210ENST00000572824 MS4A1P11836 297 aa12.26□□□□□ -0.45
NPLOC4-210ENST00000572824 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-210ENST00000572824 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
NPLOC4-210ENST00000572824 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
NPLOC4-210ENST00000572824 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 ANXA1P04083 346 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 LMNB1P20700 586 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 PRPF40BQ6NWY9 871 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 BRIP1Q9BX63 1249 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 TEX13AQ9BXU3 409 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 NBPF3Q9H094 633 aa12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 FAM217BQ9NTX9 383 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-210ENST00000572824 HRO43593 1189 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 COL4A1P02462 1669 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 SRGNP10124 158 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 NFE2L2Q16236 605 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 ZNF428Q96B54 188 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 KRTAP3-2Q9BYR7 98 aa12.24□□□□□ -0.45
NPLOC4-210ENST00000572824 SNED1Q8TER0 1413 aa12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 MYL6BP14649 208 aa12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
NPLOC4-210ENST00000572824 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 POTEMA6NI47 508 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 NPHP1O15259 732 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 GPTP24298 496 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 PDE6BP35913 854 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
NPLOC4-210ENST00000572824 ZNF541Q9H0D2 1346 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 GLTPD2A6NH11 291 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 APLP1P51693 650 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 ST5P78524 1137 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 C7orf43Q8WVR3 580 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 DDRGK1Q96HY6 314 aa12.21□□□□□ -0.45
NPLOC4-210ENST00000572824 HTATSF1O43719 755 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 DDNO94850 711 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 STYK1Q6J9G0 422 aa12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 C16orf71Q8IYS4 520 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 ZNF277Q9NRM2 450 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 ADAMTSL1Q8N6G6 1762 aa12.2□□□□□ -0.46
NPLOC4-210ENST00000572824 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-210ENST00000572824 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
NPLOC4-210ENST00000572824 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-210ENST00000572824 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
NPLOC4-210ENST00000572824 MAPK8IP3Q9UPT6 1336 aa12.18□□□□□ -0.46
NPLOC4-210ENST00000572824 CLEC4GQ6UXB4 293 aa12.18□□□□□ -0.46
NPLOC4-210ENST00000572824 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-210ENST00000572824 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
NPLOC4-210ENST00000572824 SCN4AP35499 1836 aa12.18□□□□□ -0.46
NPLOC4-210ENST00000572824 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 ZC3H4Q9UPT8 1303 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 RIPK4P57078 832 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 SYNE4Q8N205 404 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 ZNF652Q9Y2D9 606 aa12.17□□□□□ -0.46
NPLOC4-210ENST00000572824 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 NTSR2O95665 410 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 NPR1P16066 1061 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 FSTL1Q12841 308 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 SULF1Q8IWU6 871 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
NPLOC4-210ENST00000572824 RIC1Q4ADV7 1423 aa12.15□□□□□ -0.46
NPLOC4-210ENST00000572824 CD46P15529 392 aa12.15□□□□□ -0.46
NPLOC4-210ENST00000572824 VEGFAP15692 232 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms