RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SETDB1Q15047 1291 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 NSUN5Q96P11 429 aaKnown RBP5.43□□□□□ -1.54
SMG1-212ENST00000566328 ARXQ96QS3 562 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 FAM13BQ9NYF5 915 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 PPME1Q9Y570 386 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 GLB1P16278 677 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 SSTR4P31391 388 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 Q6ZS46 218 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 NLRP13Q86W25 1043 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 SPACA7Q96KW9 195 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 CEP41Q9BYV8 373 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 STOML1Q9UBI4 398 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 LRFN2Q9ULH4 789 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 USP20Q9Y2K6 914 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 RAXQ9Y2V3 346 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 KCNMB2Q9Y691 235 aa5.42□□□□□ -1.54
SMG1-212ENST00000566328 COL17A1Q9UMD9 1497 aaPredicted RBP5.41□□□□□ -1.54
SMG1-212ENST00000566328 A6NJR5 290 aa5.41□□□□□ -1.54
SMG1-212ENST00000566328 DHX15O43143 795 aaKnown RBP5.41□□□□□ -1.54
SMG1-212ENST00000566328 RFX1P22670 979 aa5.41□□□□□ -1.54
SMG1-212ENST00000566328 BRD2P25440 801 aaKnown RBP5.41□□□□□ -1.54
SMG1-212ENST00000566328 CD97P48960 835 aa5.41□□□□□ -1.54
SMG1-212ENST00000566328 FAM177BA6PVY3 158 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 COBLO75128 1261 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 IGLV1-40P01703 118 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 TXKP42681 527 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 IRAK1P51617 712 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 SWI5Q1ZZU3 235 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 COX20Q5RI15 118 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 PIK3R5Q8WYR1 880 aa5.4□□□□□ -1.54
SMG1-212ENST00000566328 FNDC3AQ9Y2H6 1198 aaKnown RBP5.4□□□□□ -1.54
SMG1-212ENST00000566328 SMNDC1O75940 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMG1-212ENST00000566328 CD68P34810 354 aaPredicted RBP5.39□□□□□ -1.55
SMG1-212ENST00000566328 GRIK1P39086 918 aa5.39□□□□□ -1.55
SMG1-212ENST00000566328 HYAL2Q12891 473 aa5.39□□□□□ -1.55
SMG1-212ENST00000566328 UVSSAQ2YD98 709 aa5.39□□□□□ -1.55
SMG1-212ENST00000566328 FAM117BQ6P1L5 589 aa5.39□□□□□ -1.55
SMG1-212ENST00000566328 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.39□□□□□ -1.55
SMG1-212ENST00000566328 TRIM33Q9UPN9 1127 aa5.39□□□□□ -1.55
SMG1-212ENST00000566328 UBAP1LF5GYI3 381 aa5.38□□□□□ -1.55
SMG1-212ENST00000566328 PRKCSHP14314 528 aaPredicted RBP5.38□□□□□ -1.55
SMG1-212ENST00000566328 C16orf46Q6P387 395 aa5.38□□□□□ -1.55
SMG1-212ENST00000566328 INTS5Q6P9B9 1019 aaKnown RBP5.38□□□□□ -1.55
SMG1-212ENST00000566328 AGGF1Q8N302 714 aaeCLIP5.38□□□□□ -1.55
SMG1-212ENST00000566328 OR13H1Q8NG92 308 aa5.38□□□□□ -1.55
SMG1-212ENST00000566328 COL26A1Q96A83 441 aa5.38□□□□□ -1.55
SMG1-212ENST00000566328 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
SMG1-212ENST00000566328 NOVA2Q9UNW9 492 aaKnown RBP5.38□□□□□ -1.55
SMG1-212ENST00000566328 ACIN1Q9UKV3 1341 aaKnown RBP5.38□□□□□ -1.55
SMG1-212ENST00000566328 KIAA1324LA8MWY0 1029 aaPredicted RBP5.37□□□□□ -1.55
SMG1-212ENST00000566328 LINC01387J3KSC0 135 aa5.37□□□□□ -1.55
SMG1-212ENST00000566328 FKBP5Q13451 457 aaPredicted RBP5.37□□□□□ -1.55
SMG1-212ENST00000566328 TTC39BQ5VTQ0 682 aaPredicted RBP5.37□□□□□ -1.55
SMG1-212ENST00000566328 ETFBKMTQ8IXQ9 262 aa5.37□□□□□ -1.55
SMG1-212ENST00000566328 KLHL23Q8NBE8 558 aa5.37□□□□□ -1.55
SMG1-212ENST00000566328 CDC27P30260 824 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 SCNN1AP37088 669 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 NFIAQ12857 509 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 TRIP4Q15650 581 aaPredicted RBP5.36□□□□□ -1.55
SMG1-212ENST00000566328 CFAP70Q5T0N1 1121 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 CEP135Q66GS9 1140 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 ACAD11Q709F0 780 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 GALNT11Q8NCW6 608 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 UTP4Q969X6 686 aaKnown RBP5.36□□□□□ -1.55
SMG1-212ENST00000566328 PRIMPOLQ96LW4 560 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 UBL7Q96S82 380 aaPredicted RBP5.36□□□□□ -1.55
SMG1-212ENST00000566328 LACRTQ9GZZ8 138 aa5.36□□□□□ -1.55
SMG1-212ENST00000566328 TGFB1P01137 390 aa5.35□□□□□ -1.55
SMG1-212ENST00000566328 YBX3P16989 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMG1-212ENST00000566328 GP2P55259 537 aaKnown RBP5.35□□□□□ -1.55
SMG1-212ENST00000566328 DUOXA2Q1HG44 320 aa5.35□□□□□ -1.55
SMG1-212ENST00000566328 FMNL2Q96PY5 1086 aa5.35□□□□□ -1.55
SMG1-212ENST00000566328 FSCN2O14926 492 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 SART1O43290 800 aaKnown RBP5.34□□□□□ -1.55
SMG1-212ENST00000566328 PRMT3O60678 531 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 PTPRAP18433 802 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 ELOAQ14241 798 aaKnown RBP5.34□□□□□ -1.55
SMG1-212ENST00000566328 TMEM132AQ24JP5 1023 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 RNF43Q68DV7 783 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 ARMC10Q8N2F6 343 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 FAM46AQ96IP4 442 aaKnown RBP5.34□□□□□ -1.55
SMG1-212ENST00000566328 MYRFLQ96LU7 910 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 DBNDD2Q9BQY9 259 aa5.34□□□□□ -1.55
SMG1-212ENST00000566328 ABI2Q9NYB9 513 aaPredicted RBP5.34□□□□□ -1.55
SMG1-212ENST00000566328 KIF4AO95239 1232 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 WISP1O95388 367 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 CDC25BP30305 580 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 ZAP70P43403 619 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 CABP4P57796 275 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 ATP11AP98196 1134 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 OCLNQ16625 522 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 CDCA8Q53HL2 280 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 NCAPG2Q86XI2 1143 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 ZDHHC13Q8IUH4 622 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 CLEC10AQ8IUN9 316 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 TRIM42Q8IWZ5 723 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 ABTB2Q8N961 1025 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 WNT8BQ93098 351 aa5.33□□□□□ -1.56
SMG1-212ENST00000566328 PBX4Q9BYU1 374 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms