RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 JAZF1Q86VZ6 243 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 TUT1Q9H6E5 874 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 SPATA31A5Q5VU36 1347 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 SPATA31A7Q8IWB4 1347 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 SCAMP3O14828 347 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 ATF3P18847 181 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 IRX3P78415 501 aaPredicted RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 HDLBPQ00341 1268 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 PDE3BQ13370 1112 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 DHX8Q14562 1220 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 EAPPQ56P03 285 aaPredicted RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 TMEM164Q5U3C3 297 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 ICE2Q659A1 982 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 KSR2Q6VAB6 950 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 CDC5LQ99459 802 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 ACBD3Q9H3P7 528 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 TSKSQ9UJT2 592 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 INPP5FQ9Y2H2 1132 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 DLEC1Q9Y238 1755 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 GOLGA6L6A8MZA4 724 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 RIMBP2O15034 1052 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 CLCN1P35523 988 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 SSR1P43307 286 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 GYS2P54840 703 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 NBPF1Q3BBV0 1214 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 NBPF8Q3BBV2 869 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 NBPF14Q5TI25 921 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 ADAMTS19Q8TE59 1207 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 MYCBPQ99417 103 aaPredicted RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 MAF1Q9H063 256 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 RSPH9Q9H1X1 276 aaPredicted RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 DDX56Q9NY93 547 aaKnown RBP3.78□□□□□ -1.8
CHD9-216ENST00000565803 KLF15Q9UIH9 416 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 ANKARQ7Z5J8 1434 aa3.78□□□□□ -1.8
CHD9-216ENST00000565803 LAMB1P07942 1786 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 TMEM88BA6NKF7 163 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 HDGFP51858 240 aaKnown RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 C4orf46Q504U0 113 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 NBPF11Q86T75 865 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 METTL3Q86U44 580 aaKnown RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 LAPTM4BQ86VI4 370 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 AS3MTQ9HBK9 375 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 VTI1BQ9UEU0 232 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 GNEQ9Y223 722 aaKnown RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 ARHGEF10O15013 1369 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 TRIM6-TRIM34B2RNG4 842 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 GRIN3BO60391 1043 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 MAPK8P45983 427 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 PPP4R3BQ5MIZ7 849 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 FAM196AQ6ZSG2 479 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 NPAS4Q8IUM7 802 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 VPS37AQ8NEZ2 397 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 NUDT7P0C024 238 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 RRM1P23921 792 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 MAP9Q49MG5 647 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 SPATA31A3Q5VYP0 1347 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 ZSCAN29Q8IWY8 852 aaPredicted RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 DEPDC4Q8N2C3 294 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 ZNF513Q8N8E2 541 aaPredicted RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 SYT17Q9BSW7 474 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 ARHGEF10LQ9HCE6 1279 aa3.77□□□□□ -1.81
CHD9-216ENST00000565803 BSDC1Q9NW68 430 aaPredicted RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 PUF60Q9UHX1 559 aaKnown RBP3.77□□□□□ -1.81
CHD9-216ENST00000565803 SMG6Q86US8 1419 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 PLEKHG2Q9H7P9 1386 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 NPHP3Q7Z494 1330 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 LGR5O75473 907 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 LMNB1P20700 586 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 MYSM1Q5VVJ2 828 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 HDGFL2Q7Z4V5 671 aaPredicted RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 DDX12PQ92771 950 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 ARPC5LQ9BPX5 153 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 MTFR1LQ9H019 292 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 EVLQ9UI08 416 aaPredicted RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 RPGRIP1LQ68CZ1 1315 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 SOWAHDA6NJG2 315 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 PES1O00541 588 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 POU5F1Q01860 360 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 ARID5AQ03989 594 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 SEMA3FQ13275 785 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 TMEM259Q4ZIN3 620 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 CCDC92Q53HC0 331 aaPredicted RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 CT47A1Q5JQC4 288 aaPredicted RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 SKAP1Q86WV1 359 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 KRTAP3-2Q9BYR7 98 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 OSBPL2Q9H1P3 480 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 FAM217BQ9NTX9 383 aaPredicted RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 DIS3Q9Y2L1 958 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 RABGAP1Q9Y3P9 1069 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 KDM6AO15550 1401 aaPredicted RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 NAP1L1P55209 391 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 SRPK1Q96SB4 655 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 SMAD5Q99717 465 aaKnown RBP3.76□□□□□ -1.81
CHD9-216ENST00000565803 NEUROD4Q9HD90 331 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 GPCPD1Q9NPB8 672 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 PCDHGB7Q9Y5F8 929 aa3.76□□□□□ -1.81
CHD9-216ENST00000565803 ERICH4A6NGS2 130 aa3.75□□□□□ -1.81
CHD9-216ENST00000565803 MPHOSPH10O00566 681 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms