RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 GNB5O14775 395 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 LILRB5O75023 590 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 RGS9O75916 674 aaPredicted RBP7.8□□□□□ -1.16
CHD9-210ENST00000564582 CPB1P15086 417 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 MLLT1Q03111 559 aaPredicted RBP7.8□□□□□ -1.16
CHD9-210ENST00000564582 HYAL2Q12891 473 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 ECM1Q16610 540 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 PSAPL1Q6NUJ1 521 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 ZNF417Q8TAU3 575 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 TMC1Q8TDI8 760 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 SNX29Q8TEQ0 813 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 NSUN5Q96P11 429 aaKnown RBP7.8□□□□□ -1.16
CHD9-210ENST00000564582 ZNF587Q96SQ5 575 aaPredicted RBP7.8□□□□□ -1.16
CHD9-210ENST00000564582 TMEM63CQ9P1W3 806 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
CHD9-210ENST00000564582 LOC102724428A0A0B4J2F2 783 aa7.79□□□□□ -1.16
CHD9-210ENST00000564582 ZBTB42B2RXF5 422 aa7.79□□□□□ -1.16
CHD9-210ENST00000564582 EIF2AK2P19525 551 aaKnown RBP7.79□□□□□ -1.16
CHD9-210ENST00000564582 SIK1P57059 783 aa7.79□□□□□ -1.16
CHD9-210ENST00000564582 SNRPNP63162 240 aaKnown RBP7.79□□□□□ -1.16
CHD9-210ENST00000564582 MICALL1Q8N3F8 863 aa7.79□□□□□ -1.16
CHD9-210ENST00000564582 JPH1Q9HDC5 661 aaPredicted RBP7.79□□□□□ -1.16
CHD9-210ENST00000564582 PRDM6Q9NQX0 595 aa7.79□□□□□ -1.16
CHD9-210ENST00000564582 NOP53Q9NZM5 478 aaKnown RBP7.79□□□□□ -1.16
CHD9-210ENST00000564582 STARD13Q9Y3M8 1113 aa7.79□□□□□ -1.16
CHD9-210ENST00000564582 CNTNAP5Q8WYK1 1306 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 EEA1Q15075 1411 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 ABCC9O60706 1549 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 A6NHS1 94 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 SPDYE3A6NKU9 549 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 PHACTR2O75167 634 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 ALBP02768 609 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 CES1P23141 567 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
CHD9-210ENST00000564582 TNFRSF21O75509 655 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 C20orf204Q6ZNR8 217 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 HFE2Q6ZVN8 426 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 FAM9AQ8IZU1 332 aaPredicted RBP7.77□□□□□ -1.17
CHD9-210ENST00000564582 NUDT8Q8WV74 236 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 DMRTB1Q96MA1 342 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 RBCK1Q9BYM8 510 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 NAGPAQ9UK23 515 aa7.77□□□□□ -1.17
CHD9-210ENST00000564582 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
CHD9-210ENST00000564582 MAPK1P28482 360 aa7.76□□□□□ -1.17
CHD9-210ENST00000564582 PERM1Q5SV97 790 aa7.76□□□□□ -1.17
CHD9-210ENST00000564582 C1orf127Q8N9H9 656 aa7.76□□□□□ -1.17
CHD9-210ENST00000564582 TTC9Q92623 222 aa7.76□□□□□ -1.17
CHD9-210ENST00000564582 LPIN3Q9BQK8 851 aa7.76□□□□□ -1.17
CHD9-210ENST00000564582 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
CHD9-210ENST00000564582 J3QW42 95 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 KIF4AO95239 1232 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 IRS1P35568 1242 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 LINC00114Q6XXX2 140 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 ALYREFQ86V81 257 aaKnown RBP7.75□□□□□ -1.17
CHD9-210ENST00000564582 PLD4Q96BZ4 506 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 FAM129BQ96TA1 746 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 CNTN3Q9P232 1028 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
CHD9-210ENST00000564582 SMNDC1O75940 238 aaKnown RBP eCLIP7.74□□□□□ -1.17
CHD9-210ENST00000564582 CYP2E1P05181 493 aaPredicted RBP7.74□□□□□ -1.17
CHD9-210ENST00000564582 KCNMA1Q12791 1236 aa7.74□□□□□ -1.17
CHD9-210ENST00000564582 ZSCAN29Q8IWY8 852 aaPredicted RBP7.74□□□□□ -1.17
CHD9-210ENST00000564582 CACTIN-AS1Q8N1I8 211 aa7.74□□□□□ -1.17
CHD9-210ENST00000564582 KANSL3Q9P2N6 904 aa7.74□□□□□ -1.17
CHD9-210ENST00000564582 AMOTL2Q9Y2J4 779 aa7.74□□□□□ -1.17
CHD9-210ENST00000564582 EDN3P14138 238 aa7.73□□□□□ -1.17
CHD9-210ENST00000564582 AFF1P51825 1210 aaKnown RBP7.73□□□□□ -1.17
CHD9-210ENST00000564582 SND1Q7KZF4 910 aaKnown RBP eCLIP7.73□□□□□ -1.17
CHD9-210ENST00000564582 YTHDC1Q96MU7 727 aaKnown RBP7.73□□□□□ -1.17
CHD9-210ENST00000564582 FOXD3Q9UJU5 478 aaPredicted RBP7.73□□□□□ -1.17
CHD9-210ENST00000564582 TNIKQ9UKE5 1360 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 FAM177BA6PVY3 158 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 PRRT3Q5FWE3 981 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 COL13A1Q5TAT6 717 aaPredicted RBP7.72□□□□□ -1.17
CHD9-210ENST00000564582 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 ALKBH8Q96BT7 664 aaKnown RBP7.72□□□□□ -1.17
CHD9-210ENST00000564582 PLVAPQ9BX97 442 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 CHRDQ9H2X0 955 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 ZFYVE28Q9HCC9 887 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 SALL4Q9UJQ4 1053 aa7.72□□□□□ -1.17
CHD9-210ENST00000564582 RSF1Q96T23 1441 aaPredicted RBP7.71□□□□□ -1.17
CHD9-210ENST00000564582 CPNE3O75131 537 aaKnown RBP7.71□□□□□ -1.18
CHD9-210ENST00000564582 NID1P14543 1247 aa7.71□□□□□ -1.18
CHD9-210ENST00000564582 TRAPPC3LQ5T215 181 aa7.71□□□□□ -1.18
CHD9-210ENST00000564582 CEP135Q66GS9 1140 aa7.71□□□□□ -1.18
CHD9-210ENST00000564582 WFDC8Q8IUA0 241 aa7.71□□□□□ -1.18
CHD9-210ENST00000564582 CEP120Q8N960 986 aa7.71□□□□□ -1.18
CHD9-210ENST00000564582 TRIM11Q96F44 468 aa7.71□□□□□ -1.18
CHD9-210ENST00000564582 ZBTB7CA1YPR0 619 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 EREGO14944 169 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 GPR182O15218 404 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 RAC1P63000 192 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 RASSF7Q02833 373 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 MSL1Q68DK7 614 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 GDF6Q6KF10 455 aaPredicted RBP7.7□□□□□ -1.18
CHD9-210ENST00000564582 TMC7Q7Z402 723 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 PBX4Q9BYU1 374 aa7.7□□□□□ -1.18
CHD9-210ENST00000564582 NIF3L1Q9GZT8 377 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms