RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FAM13AO94988 1023 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 EIF2AK2P19525 551 aaKnown RBP9.36□□□□□ -0.91
UBR1-205ENST00000564540 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
UBR1-205ENST00000564540 LCE3BQ5TA77 95 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 ELMSAN1Q6PJG2 1045 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 OR13H1Q8NG92 308 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 ELP3Q9H9T3 547 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 TMEM63CQ9P1W3 806 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 POLIQ9UNA4 740 aa9.36□□□□□ -0.91
UBR1-205ENST00000564540 LOC102724428A0A0B4J2F2 783 aa9.35□□□□□ -0.91
UBR1-205ENST00000564540 MZF1P28698 734 aaPredicted RBP9.35□□□□□ -0.91
UBR1-205ENST00000564540 SOX18P35713 384 aa9.35□□□□□ -0.91
UBR1-205ENST00000564540 SIK1P57059 783 aa9.35□□□□□ -0.91
UBR1-205ENST00000564540 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
UBR1-205ENST00000564540 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
UBR1-205ENST00000564540 TTC39BQ5VTQ0 682 aaPredicted RBP9.35□□□□□ -0.91
UBR1-205ENST00000564540 ALKBH2Q6NS38 261 aa9.35□□□□□ -0.91
UBR1-205ENST00000564540 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
UBR1-205ENST00000564540 ABI2Q9NYB9 513 aaPredicted RBP9.35□□□□□ -0.91
UBR1-205ENST00000564540 H3BRB1 525 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 FZD6O60353 706 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 ICMTO60725 284 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 CYP2E1P05181 493 aaPredicted RBP9.34□□□□□ -0.91
UBR1-205ENST00000564540 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
UBR1-205ENST00000564540 PDE4CQ08493 712 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 GRIK5Q16478 980 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 PDE12Q6L8Q7 609 aaKnown RBP9.34□□□□□ -0.91
UBR1-205ENST00000564540 ZNF438Q7Z4V0 828 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 TUT1Q9H6E5 874 aaKnown RBP9.34□□□□□ -0.91
UBR1-205ENST00000564540 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
UBR1-205ENST00000564540 PCSK2P16519 638 aa9.33□□□□□ -0.92
UBR1-205ENST00000564540 TRAPPC3LQ5T215 181 aa9.33□□□□□ -0.92
UBR1-205ENST00000564540 PLD4Q96BZ4 506 aa9.33□□□□□ -0.92
UBR1-205ENST00000564540 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
UBR1-205ENST00000564540 EGFL7Q9UHF1 273 aa9.33□□□□□ -0.92
UBR1-205ENST00000564540 GHRHP01286 108 aa9.32□□□□□ -0.92
UBR1-205ENST00000564540 ECM1Q16610 540 aa9.32□□□□□ -0.92
UBR1-205ENST00000564540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
UBR1-205ENST00000564540 RPLP1P05386 114 aaKnown RBP9.31□□□□□ -0.92
UBR1-205ENST00000564540 CHRNA4P43681 627 aa9.31□□□□□ -0.92
UBR1-205ENST00000564540 ZMYM1Q5SVZ6 1142 aa9.31□□□□□ -0.92
UBR1-205ENST00000564540 GLYCTKQ8IVS8 523 aa9.31□□□□□ -0.92
UBR1-205ENST00000564540 DMRTC2Q8IXT2 367 aaPredicted RBP9.31□□□□□ -0.92
UBR1-205ENST00000564540 TTC16Q8NEE8 873 aa9.31□□□□□ -0.92
UBR1-205ENST00000564540 SEMA6BQ9H3T3 888 aa9.31□□□□□ -0.92
UBR1-205ENST00000564540 KANSL3Q9P2N6 904 aa9.31□□□□□ -0.92
UBR1-205ENST00000564540 SPDYE3A6NKU9 549 aa9.3□□□□□ -0.92
UBR1-205ENST00000564540 SPATA31C1P0DKV0 1188 aa9.3□□□□□ -0.92
UBR1-205ENST00000564540 HYAL2Q12891 473 aa9.3□□□□□ -0.92
UBR1-205ENST00000564540 PRRT3Q5FWE3 981 aa9.3□□□□□ -0.92
UBR1-205ENST00000564540 XKR5Q6UX68 686 aa9.3□□□□□ -0.92
UBR1-205ENST00000564540 C1orf127Q8N9H9 656 aa9.3□□□□□ -0.92
UBR1-205ENST00000564540 A0A0A0MRY4 1105 aa9.29□□□□□ -0.92
UBR1-205ENST00000564540 ATP11AP98196 1134 aa9.29□□□□□ -0.92
UBR1-205ENST00000564540 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
UBR1-205ENST00000564540 TTC9Q92623 222 aa9.29□□□□□ -0.92
UBR1-205ENST00000564540 ARHGAP4P98171 946 aa9.28□□□□□ -0.92
UBR1-205ENST00000564540 GRIK4Q16099 956 aa9.28□□□□□ -0.92
UBR1-205ENST00000564540 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
UBR1-205ENST00000564540 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
UBR1-205ENST00000564540 ILDR2Q71H61 639 aa9.28□□□□□ -0.92
UBR1-205ENST00000564540 RBSNQ9H1K0 784 aa9.28□□□□□ -0.92
UBR1-205ENST00000564540 WFDC8Q8IUA0 241 aa9.27□□□□□ -0.93
UBR1-205ENST00000564540 GJD3Q8N144 294 aa9.27□□□□□ -0.93
UBR1-205ENST00000564540 CCER1Q8TC90 406 aaPredicted RBP9.27□□□□□ -0.93
UBR1-205ENST00000564540 CHRDQ9H2X0 955 aa9.27□□□□□ -0.93
UBR1-205ENST00000564540 TRIM33Q9UPN9 1127 aa9.27□□□□□ -0.93
UBR1-205ENST00000564540 KIF4AO95239 1232 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 BRD1O95696 1058 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 CES1P23141 567 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 USP5P45974 858 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 NCAPG2Q86XI2 1143 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 SPACA7Q96KW9 195 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
UBR1-205ENST00000564540 FOXD3Q9UJU5 478 aaPredicted RBP9.26□□□□□ -0.93
UBR1-205ENST00000564540 TNFRSF21O75509 655 aa9.25□□□□□ -0.93
UBR1-205ENST00000564540 ACPPP15309 386 aa9.25□□□□□ -0.93
UBR1-205ENST00000564540 DOC2BQ14184 412 aa9.25□□□□□ -0.93
UBR1-205ENST00000564540 ADAMTSL4Q6UY14 1074 aa9.25□□□□□ -0.93
UBR1-205ENST00000564540 CEP120Q8N960 986 aa9.25□□□□□ -0.93
UBR1-205ENST00000564540 RAC1P63000 192 aa9.24□□□□□ -0.93
UBR1-205ENST00000564540 CEP135Q66GS9 1140 aa9.24□□□□□ -0.93
UBR1-205ENST00000564540 FMR1NBQ8N0W7 255 aaPredicted RBP9.24□□□□□ -0.93
UBR1-205ENST00000564540 IL22RA1Q8N6P7 574 aa9.24□□□□□ -0.93
UBR1-205ENST00000564540 SALL4Q9UJQ4 1053 aa9.24□□□□□ -0.93
UBR1-205ENST00000564540 BRPF3Q9ULD4 1205 aa9.24□□□□□ -0.93
UBR1-205ENST00000564540 EREGO14944 169 aa9.23□□□□□ -0.93
UBR1-205ENST00000564540 PHACTR2O75167 634 aa9.23□□□□□ -0.93
UBR1-205ENST00000564540 APBA3O96018 575 aa9.23□□□□□ -0.93
UBR1-205ENST00000564540 EHHADHQ08426 723 aa9.23□□□□□ -0.93
UBR1-205ENST00000564540 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
UBR1-205ENST00000564540 LACRTQ9GZZ8 138 aa9.23□□□□□ -0.93
UBR1-205ENST00000564540 GNEQ9Y223 722 aaKnown RBP9.23□□□□□ -0.93
UBR1-205ENST00000564540 SOWAHDA6NJG2 315 aa9.22□□□□□ -0.93
UBR1-205ENST00000564540 DEAF1O75398 565 aaPredicted RBP9.22□□□□□ -0.93
UBR1-205ENST00000564540 TRPA1O75762 1119 aa9.22□□□□□ -0.93
UBR1-205ENST00000564540 ELNP15502 786 aa9.22□□□□□ -0.93
UBR1-205ENST00000564540 SELPP16109 830 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms