RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 DDX60Q8IY21 1712 aaKnown RBP23.93■■□□□ 1.42
E4F1-203ENST00000563643 RANBP2P49792 3224 aaKnown RBP23.92■■□□□ 1.42
E4F1-203ENST00000563643 C6orf229H3BNL8 230 aa23.92■■□□□ 1.42
E4F1-203ENST00000563643 ZNF280AP59817 542 aaPredicted RBP23.92■■□□□ 1.42
E4F1-203ENST00000563643 OTOP1Q7RTM1 612 aa23.92■■□□□ 1.42
E4F1-203ENST00000563643 POLLQ9UGP5 575 aa23.92■■□□□ 1.42
E4F1-203ENST00000563643 CEP290O15078 2479 aa23.92■■□□□ 1.42
E4F1-203ENST00000563643 KIAA0100Q14667 2235 aaKnown RBP23.92■■□□□ 1.42
E4F1-203ENST00000563643 PITPNM2Q9BZ72 1349 aa23.91■■□□□ 1.42
E4F1-203ENST00000563643 EN2P19622 333 aaPredicted RBP23.91■■□□□ 1.42
E4F1-203ENST00000563643 CUL9Q8IWT3 2517 aa23.9■■□□□ 1.42
E4F1-203ENST00000563643 EIF4A1P60842 406 aaKnown RBP23.9■■□□□ 1.42
E4F1-203ENST00000563643 EYA3Q99504 573 aa23.9■■□□□ 1.42
E4F1-203ENST00000563643 TAF1P21675 1872 aa23.9■■□□□ 1.42
E4F1-203ENST00000563643 ERBB4Q15303 1308 aa23.89■■□□□ 1.42
E4F1-203ENST00000563643 KDM3BQ7LBC6 1761 aa23.89■■□□□ 1.42
E4F1-203ENST00000563643 TTLL12Q14166 644 aaPredicted RBP23.89■■□□□ 1.41
E4F1-203ENST00000563643 SCAF8Q9UPN6 1271 aaKnown RBP23.89■■□□□ 1.41
E4F1-203ENST00000563643 ZNF609O15014 1411 aa23.88■■□□□ 1.41
E4F1-203ENST00000563643 GPSM2P81274 684 aa23.88■■□□□ 1.41
E4F1-203ENST00000563643 NLRP10Q86W26 655 aa23.88■■□□□ 1.41
E4F1-203ENST00000563643 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
E4F1-203ENST00000563643 TRMT112Q9UI30 125 aaKnown RBP23.88■■□□□ 1.41
E4F1-203ENST00000563643 SH3TC1Q8TE82 1336 aa23.87■■□□□ 1.41
E4F1-203ENST00000563643 CNGB1Q14028 1251 aaPredicted RBP23.87■■□□□ 1.41
E4F1-203ENST00000563643 PRAMEF18Q5VWM3 479 aa23.87■■□□□ 1.41
E4F1-203ENST00000563643 LRP10Q7Z4F1 713 aa23.87■■□□□ 1.41
E4F1-203ENST00000563643 SLC17A8Q8NDX2 589 aa23.87■■□□□ 1.41
E4F1-203ENST00000563643 THUMPD2Q9BTF0 503 aaKnown RBP23.87■■□□□ 1.41
E4F1-203ENST00000563643 SCN9AQ15858 1988 aa23.87■■□□□ 1.41
E4F1-203ENST00000563643 ALDH1A1P00352 501 aa23.86■■□□□ 1.41
E4F1-203ENST00000563643 CELF1Q92879 486 aaKnown RBP23.86■■□□□ 1.41
E4F1-203ENST00000563643 ARMC5Q96C12 935 aa23.86■■□□□ 1.41
E4F1-203ENST00000563643 MYOZ2Q9NPC6 264 aa23.86■■□□□ 1.41
E4F1-203ENST00000563643 U2AF1L5P0DN76 240 aaPredicted RBP23.85■■□□□ 1.41
E4F1-203ENST00000563643 U2AF1Q01081 240 aaKnown RBP eCLIP23.85■■□□□ 1.41
E4F1-203ENST00000563643 RSBN1LQ6PCB5 846 aaPredicted RBP23.85■■□□□ 1.41
E4F1-203ENST00000563643 AGBL3Q8NEM8 1001 aa23.85■■□□□ 1.41
E4F1-203ENST00000563643 TBC1D16Q8TBP0 767 aa23.85■■□□□ 1.41
E4F1-203ENST00000563643 PTPN22Q9Y2R2 807 aa23.85■■□□□ 1.41
E4F1-203ENST00000563643 COL6A3P12111 3177 aa23.84■■□□□ 1.41
E4F1-203ENST00000563643 CFAP53Q96M91 514 aa23.84■■□□□ 1.41
E4F1-203ENST00000563643 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
E4F1-203ENST00000563643 TCIRG1Q13488 830 aa23.83■■□□□ 1.41
E4F1-203ENST00000563643 HSP90AB3PQ58FF7 597 aa23.83■■□□□ 1.41
E4F1-203ENST00000563643 OTUD5Q96G74 571 aa23.83■■□□□ 1.41
E4F1-203ENST00000563643 ZC3H12CQ9C0D7 883 aaKnown RBP23.83■■□□□ 1.41
E4F1-203ENST00000563643 H0YGN5 161 aa23.82■■□□□ 1.4
E4F1-203ENST00000563643 USP17L8P0C7I0 530 aa23.82■■□□□ 1.4
E4F1-203ENST00000563643 PDIA6Q15084 440 aa23.82■■□□□ 1.4
E4F1-203ENST00000563643 NECTIN2Q92692 538 aa23.82■■□□□ 1.4
E4F1-203ENST00000563643 COL4A1P02462 1669 aa23.82■■□□□ 1.4
E4F1-203ENST00000563643 G3V3G9 751 aa23.81■■□□□ 1.4
E4F1-203ENST00000563643 NF2P35240 595 aa23.81■■□□□ 1.4
E4F1-203ENST00000563643 DCAF8Q5TAQ9 597 aa23.81■■□□□ 1.4
E4F1-203ENST00000563643 SPRYD7Q5W111 196 aa23.81■■□□□ 1.4
E4F1-203ENST00000563643 PTPN12Q05209 780 aaKnown RBP23.8■■□□□ 1.4
E4F1-203ENST00000563643 PROSER3Q2NL68 480 aa23.8■■□□□ 1.4
E4F1-203ENST00000563643 GMLQ99445 158 aa23.8■■□□□ 1.4
E4F1-203ENST00000563643 ANXA1P04083 346 aa23.79■■□□□ 1.4
E4F1-203ENST00000563643 ERO1AQ96HE7 468 aa23.79■■□□□ 1.4
E4F1-203ENST00000563643 TMEM106CQ9BVX2 250 aa23.79■■□□□ 1.4
E4F1-203ENST00000563643 NBPF9Q3BBW0 867 aa23.78■■□□□ 1.4
E4F1-203ENST00000563643 CHRDL2Q6WN34 429 aa23.78■■□□□ 1.4
E4F1-203ENST00000563643 IFNL1Q8IU54 200 aa23.78■■□□□ 1.4
E4F1-203ENST00000563643 CD99L2Q8TCZ2 262 aa23.78■■□□□ 1.4
E4F1-203ENST00000563643 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
E4F1-203ENST00000563643 SF3B3Q15393 1217 aaKnown RBP23.77■■□□□ 1.4
E4F1-203ENST00000563643 ARMC9Q7Z3E5 817 aa23.77■■□□□ 1.4
E4F1-203ENST00000563643 MANSC4A6NHS7 340 aaPredicted RBP23.76■■□□□ 1.39
E4F1-203ENST00000563643 UFL1O94874 794 aa23.76■■□□□ 1.39
E4F1-203ENST00000563643 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
E4F1-203ENST00000563643 INHBEP58166 350 aa23.76■■□□□ 1.39
E4F1-203ENST00000563643 PRKG1Q13976 671 aa23.76■■□□□ 1.39
E4F1-203ENST00000563643 ZNF333Q96JL9 665 aa23.76■■□□□ 1.39
E4F1-203ENST00000563643 EFCC1Q9HA90 598 aa23.76■■□□□ 1.39
E4F1-203ENST00000563643 PODXL2Q9NZ53 605 aa23.76■■□□□ 1.39
E4F1-203ENST00000563643 AIMP1Q12904 312 aaKnown RBP23.75■■□□□ 1.39
E4F1-203ENST00000563643 LDLRAD1Q5T700 205 aa23.75■■□□□ 1.39
E4F1-203ENST00000563643 COPS6Q7L5N1 327 aa23.75■■□□□ 1.39
E4F1-203ENST00000563643 IGF2BP3O00425 579 aaKnown RBP eCLIP23.74■■□□□ 1.39
E4F1-203ENST00000563643 RBM27Q9P2N5 1060 aaKnown RBP23.74■■□□□ 1.39
E4F1-203ENST00000563643 RPS8P62241 208 aaKnown RBP23.73■■□□□ 1.39
E4F1-203ENST00000563643 XAGE3Q8WTP9 111 aa23.73■■□□□ 1.39
E4F1-203ENST00000563643 ANKIB1Q9P2G1 1089 aa23.73■■□□□ 1.39
E4F1-203ENST00000563643 FAM89AQ96GI7 184 aa23.72■■□□□ 1.39
E4F1-203ENST00000563643 GGA1Q9UJY5 639 aa23.72■■□□□ 1.39
E4F1-203ENST00000563643 PSME4Q14997 1843 aa23.72■■□□□ 1.39
E4F1-203ENST00000563643 LAMA3Q16787 3333 aa23.72■■□□□ 1.39
E4F1-203ENST00000563643 USP17L3A6NCW0 530 aa23.71■■□□□ 1.39
E4F1-203ENST00000563643 USP17L4A6NCW7 530 aa23.71■■□□□ 1.39
E4F1-203ENST00000563643 WNT10BO00744 389 aa23.71■■□□□ 1.39
E4F1-203ENST00000563643 USP17L1Q7RTZ2 530 aa23.71■■□□□ 1.39
E4F1-203ENST00000563643 ANGEL1Q9UNK9 670 aaKnown RBP23.71■■□□□ 1.39
E4F1-203ENST00000563643 ZBTB48P10074 688 aaPredicted RBP23.7■■□□□ 1.38
E4F1-203ENST00000563643 CAP1Q01518 475 aa23.7■■□□□ 1.38
E4F1-203ENST00000563643 CRHR2Q13324 411 aa23.7■■□□□ 1.38
E4F1-203ENST00000563643 DDX10Q13206 875 aaKnown RBP23.69■■□□□ 1.38
E4F1-203ENST00000563643 SLC4A8Q2Y0W8 1093 aa23.69■■□□□ 1.38
E4F1-203ENST00000563643 FZD1Q9UP38 647 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms