RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 BARGINQ6ZT62 677 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 ALDH8A1Q9H2A2 487 aaPredicted RBP11.73□□□□□ -0.53
SMG1-205ENST00000561947 HELLSQ9NRZ9 838 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 SMC3Q9UQE7 1217 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
SMG1-205ENST00000561947 RPS6KB1P23443 525 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 MRE11P49959 708 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 KRT32Q14532 448 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
SMG1-205ENST00000561947 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 EIF5P55010 431 aaKnown RBP11.73□□□□□ -0.53
SMG1-205ENST00000561947 CCDC158Q5M9N0 1113 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 INTS5Q6P9B9 1019 aaKnown RBP11.73□□□□□ -0.53
SMG1-205ENST00000561947 CCDC83Q8IWF9 413 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 ZNF34Q8IZ26 560 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 ACSBG1Q96GR2 724 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 XAGE2Q96GT9 111 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 GREM2Q9H772 168 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 ITGA6P23229 1130 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 ADORA1P30542 326 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 ANKRD1Q15327 319 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 ME3Q16798 604 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 UBN2Q6ZU65 1347 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 A0A0G2JS52 829 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 ANKRD18BA2A2Z9 1011 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 PDE8AO60658 829 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 TOM1O60784 492 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 ST3GAL1Q11201 340 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
SMG1-205ENST00000561947 TTC39AQ5SRH9 613 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 TPCN1Q9ULQ1 816 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 RIPOR2Q9Y4F9 1068 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 MYH7P12883 1935 aa11.72□□□□□ -0.53
SMG1-205ENST00000561947 LAMA4Q16363 1823 aa11.71□□□□□ -0.53
SMG1-205ENST00000561947 LRP5O75197 1615 aa11.71□□□□□ -0.53
SMG1-205ENST00000561947 MYH14Q7Z406 1995 aaKnown RBP11.71□□□□□ -0.53
SMG1-205ENST00000561947 LOC102724428A0A0B4J2F2 783 aa11.71□□□□□ -0.53
SMG1-205ENST00000561947 RNF113AO15541 343 aaKnown RBP11.71□□□□□ -0.53
SMG1-205ENST00000561947 SIK1P57059 783 aa11.71□□□□□ -0.53
SMG1-205ENST00000561947 PIP4K2BP78356 416 aa11.71□□□□□ -0.53
SMG1-205ENST00000561947 GPT2Q8TD30 523 aa11.71□□□□□ -0.53
SMG1-205ENST00000561947 TCHHQ07283 1943 aa11.71□□□□□ -0.54
SMG1-205ENST00000561947 ABCC12Q96J65 1359 aa11.71□□□□□ -0.54
SMG1-205ENST00000561947 STX6O43752 255 aa11.71□□□□□ -0.54
SMG1-205ENST00000561947 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.54
SMG1-205ENST00000561947 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.54
SMG1-205ENST00000561947 METTL24Q5JXM2 366 aa11.71□□□□□ -0.54
SMG1-205ENST00000561947 LDHAL6AQ6ZMR3 332 aa11.71□□□□□ -0.54
SMG1-205ENST00000561947 GAS2L3Q86XJ1 694 aa11.71□□□□□ -0.54
SMG1-205ENST00000561947 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
SMG1-205ENST00000561947 ZSCAN22P10073 491 aaPredicted RBP11.7□□□□□ -0.54
SMG1-205ENST00000561947 SYT1P21579 422 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 GJB2P29033 226 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 CAVIN1Q6NZI2 390 aaKnown RBP11.7□□□□□ -0.54
SMG1-205ENST00000561947 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 CYP21A2P08686 494 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
SMG1-205ENST00000561947 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
SMG1-205ENST00000561947 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 AK7Q96M32 723 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 MAST3O60307 1309 aa11.7□□□□□ -0.54
SMG1-205ENST00000561947 ZNF831Q5JPB2 1677 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 LAMB2P55268 1798 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 MBD3O95983 291 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 ZNF445P59923 1031 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 FKBP4Q02790 459 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMG1-205ENST00000561947 ITPK1Q13572 414 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
SMG1-205ENST00000561947 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 PANK2Q9BZ23 570 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
SMG1-205ENST00000561947 ZSCAN23Q3MJ62 389 aa11.68□□□□□ -0.54
SMG1-205ENST00000561947 SMARCC1Q92922 1105 aaPredicted RBP11.68□□□□□ -0.54
SMG1-205ENST00000561947 M0R2C6 588 aa11.68□□□□□ -0.54
SMG1-205ENST00000561947 CAMTA2O94983 1202 aa11.68□□□□□ -0.54
SMG1-205ENST00000561947 F13A1P00488 732 aa11.68□□□□□ -0.54
SMG1-205ENST00000561947 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
SMG1-205ENST00000561947 SCARF1Q14162 830 aa11.68□□□□□ -0.54
SMG1-205ENST00000561947 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
SMG1-205ENST00000561947 HSPD1P10809 573 aaKnown RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 ZAP70P43403 619 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 PARP10Q53GL7 1025 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
SMG1-205ENST00000561947 MTMR6Q9Y217 621 aa11.67□□□□□ -0.54
SMG1-205ENST00000561947 PDE8BO95263 885 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms