RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MKL2Q9ULH7 1088 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 M0R082 166 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 RGS9O75916 674 aaPredicted RBP8.6□□□□□ -1.03
USP8-218ENST00000561330 GHRHP01286 108 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 ALBP02768 609 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 CYP2E1P05181 493 aaPredicted RBP8.6□□□□□ -1.03
USP8-218ENST00000561330 NEFLP07196 543 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
USP8-218ENST00000561330 DGKGP49619 791 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 ELMSAN1Q6PJG2 1045 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 C20orf204Q6ZNR8 217 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 ZNF417Q8TAU3 575 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 SPACA7Q96KW9 195 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 ZNF587Q96SQ5 575 aaPredicted RBP8.6□□□□□ -1.03
USP8-218ENST00000561330 FAM129BQ96TA1 746 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 FRRS1LQ9P0K9 344 aa8.6□□□□□ -1.03
USP8-218ENST00000561330 PIK3R2O00459 728 aa8.59□□□□□ -1.03
USP8-218ENST00000561330 LILRB5O75023 590 aa8.59□□□□□ -1.03
USP8-218ENST00000561330 PERM1Q5SV97 790 aa8.59□□□□□ -1.03
USP8-218ENST00000561330 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
USP8-218ENST00000561330 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
USP8-218ENST00000561330 DMRTB1Q96MA1 342 aa8.59□□□□□ -1.03
USP8-218ENST00000561330 JPH1Q9HDC5 661 aaPredicted RBP8.59□□□□□ -1.03
USP8-218ENST00000561330 FOXD3Q9UJU5 478 aaPredicted RBP8.59□□□□□ -1.03
USP8-218ENST00000561330 CNTNAP5Q8WYK1 1306 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 LINC00114Q6XXX2 140 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 TMC7Q7Z402 723 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 LPIN3Q9BQK8 851 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 GZF1Q9H116 711 aaPredicted RBP8.58□□□□□ -1.04
USP8-218ENST00000561330 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 PRDM6Q9NQX0 595 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 KANSL3Q9P2N6 904 aa8.58□□□□□ -1.04
USP8-218ENST00000561330 KIF4AO95239 1232 aa8.57□□□□□ -1.04
USP8-218ENST00000561330 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
USP8-218ENST00000561330 ZSCAN29Q8IWY8 852 aaPredicted RBP8.57□□□□□ -1.04
USP8-218ENST00000561330 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
USP8-218ENST00000561330 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
USP8-218ENST00000561330 SMG9Q9H0W8 520 aaKnown RBP8.57□□□□□ -1.04
USP8-218ENST00000561330 RNF225M0QZC1 329 aaPredicted RBP8.56□□□□□ -1.04
USP8-218ENST00000561330 GNB5O14775 395 aa8.56□□□□□ -1.04
USP8-218ENST00000561330 EREGO14944 169 aa8.56□□□□□ -1.04
USP8-218ENST00000561330 GPR182O15218 404 aa8.56□□□□□ -1.04
USP8-218ENST00000561330 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
USP8-218ENST00000561330 SALL4Q9UJQ4 1053 aa8.56□□□□□ -1.04
USP8-218ENST00000561330 AMOTL2Q9Y2J4 779 aa8.56□□□□□ -1.04
USP8-218ENST00000561330 IGHA2P01877 340 aa8.55□□□□□ -1.04
USP8-218ENST00000561330 TTC9Q92623 222 aa8.55□□□□□ -1.04
USP8-218ENST00000561330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.55□□□□□ -1.04
USP8-218ENST00000561330 EDN3P14138 238 aa8.54□□□□□ -1.04
USP8-218ENST00000561330 AFF1P51825 1210 aaKnown RBP8.54□□□□□ -1.04
USP8-218ENST00000561330 ORC1Q13415 861 aa8.54□□□□□ -1.04
USP8-218ENST00000561330 CEP120Q8N960 986 aa8.54□□□□□ -1.04
USP8-218ENST00000561330 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
USP8-218ENST00000561330 ASB16Q96NS5 453 aa8.54□□□□□ -1.04
USP8-218ENST00000561330 CPNE3O75131 537 aaKnown RBP8.53□□□□□ -1.04
USP8-218ENST00000561330 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
USP8-218ENST00000561330 IRS1P35568 1242 aa8.53□□□□□ -1.04
USP8-218ENST00000561330 PLCB3Q01970 1234 aa8.53□□□□□ -1.04
USP8-218ENST00000561330 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
USP8-218ENST00000561330 PBX4Q9BYU1 374 aa8.53□□□□□ -1.04
USP8-218ENST00000561330 RASSF4Q9H2L5 321 aa8.53□□□□□ -1.04
USP8-218ENST00000561330 NOP53Q9NZM5 478 aaKnown RBP8.53□□□□□ -1.04
USP8-218ENST00000561330 SPDYE3A6NKU9 549 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 EIF1AYO14602 144 aaKnown RBP8.52□□□□□ -1.05
USP8-218ENST00000561330 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
USP8-218ENST00000561330 NID1P14543 1247 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 ATP11AP98196 1134 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 CEP135Q66GS9 1140 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 PLVAPQ9BX97 442 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 DNAJC25Q9H1X3 360 aa8.52□□□□□ -1.05
USP8-218ENST00000561330 TREHO43280 583 aa8.51□□□□□ -1.05
USP8-218ENST00000561330 DSC3Q14574 896 aa8.51□□□□□ -1.05
USP8-218ENST00000561330 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
USP8-218ENST00000561330 CSRNP1Q96S65 589 aa8.51□□□□□ -1.05
USP8-218ENST00000561330 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
USP8-218ENST00000561330 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
USP8-218ENST00000561330 ACPPP15309 386 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 GRIK5Q16478 980 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 TRAPPC3LQ5T215 181 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
USP8-218ENST00000561330 WFDC8Q8IUA0 241 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 GALNT12Q8IXK2 581 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 OSMRQ99650 979 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
USP8-218ENST00000561330 KCNMA1Q12791 1236 aa8.49□□□□□ -1.05
USP8-218ENST00000561330 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
USP8-218ENST00000561330 MSL1Q68DK7 614 aa8.49□□□□□ -1.05
USP8-218ENST00000561330 CACTIN-AS1Q8N1I8 211 aa8.49□□□□□ -1.05
USP8-218ENST00000561330 PDE2AO00408 941 aaPredicted RBP8.48□□□□□ -1.05
USP8-218ENST00000561330 TRPA1O75762 1119 aa8.48□□□□□ -1.05
USP8-218ENST00000561330 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
USP8-218ENST00000561330 IL22RA1Q8N6P7 574 aa8.48□□□□□ -1.05
USP8-218ENST00000561330 CCDC74AQ96AQ1 378 aa8.48□□□□□ -1.05
USP8-218ENST00000561330 POP1Q99575 1024 aaKnown RBP8.48□□□□□ -1.05
USP8-218ENST00000561330 ZKSCAN3Q9BRR0 538 aa8.48□□□□□ -1.05
USP8-218ENST00000561330 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms