RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 CPA1P15085 419 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 IL15P40933 162 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 TCIRG1Q13488 830 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 FOXD4L5Q5VV16 416 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 FOXD4L4Q8WXT5 416 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 HAUS7Q99871 368 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-212ENST00000559974 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-212ENST00000559974 WDR33Q9C0J8 1336 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-212ENST00000559974 SLC27A2O14975 620 aa17.33■□□□□ 0.37
RABGGTA-212ENST00000559974 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.37
RABGGTA-212ENST00000559974 RNF20Q5VTR2 975 aa17.33■□□□□ 0.37
RABGGTA-212ENST00000559974 KIF6Q6ZMV9 814 aa17.33■□□□□ 0.37
RABGGTA-212ENST00000559974 GAS2L3Q86XJ1 694 aa17.33■□□□□ 0.37
RABGGTA-212ENST00000559974 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.37
RABGGTA-212ENST00000559974 SPEF2Q9C093 1822 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 EYA2O00167 538 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 GNPATO15228 680 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 PSMA5P28066 241 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 BAG6P46379 1132 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 ZSCAN31Q96LW9 406 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 DNAJC2Q99543 621 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 MYH3P11055 1940 aa17.33■□□□□ 0.36
RABGGTA-212ENST00000559974 ZNF609O15014 1411 aa17.32■□□□□ 0.36
RABGGTA-212ENST00000559974 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
RABGGTA-212ENST00000559974 CIAO1O76071 339 aa17.32■□□□□ 0.36
RABGGTA-212ENST00000559974 PHF14O94880 888 aa17.32■□□□□ 0.36
RABGGTA-212ENST00000559974 CHAMP1Q96JM3 812 aa17.32■□□□□ 0.36
RABGGTA-212ENST00000559974 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
RABGGTA-212ENST00000559974 TAF5LO75529 589 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 SH2B1Q9NRF2 756 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 NUP98P52948 1817 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 GPT2Q8TD30 523 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
RABGGTA-212ENST00000559974 LARGE1O95461 756 aa17.3■□□□□ 0.36
RABGGTA-212ENST00000559974 ZNF445P59923 1031 aa17.3■□□□□ 0.36
RABGGTA-212ENST00000559974 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
RABGGTA-212ENST00000559974 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-212ENST00000559974 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
RABGGTA-212ENST00000559974 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
RABGGTA-212ENST00000559974 PCCAP05165 728 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 KBTBD3Q8NAB2 608 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 AK7Q96M32 723 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 RTN4Q9NQC3 1192 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-212ENST00000559974 MBD3O95983 291 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 TIMM10P62072 90 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 RC3H1Q5TC82 1133 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 BLOC1S2Q6QNY1 142 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 SRP68Q9UHB9 627 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 HLFQ16534 295 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 ZBTB38Q8NAP3 1195 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 ALDH8A1Q9H2A2 487 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
RABGGTA-212ENST00000559974 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 A0A1B0GUL7 405 aa17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 STX6O43752 255 aa17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 RPS6KA4O75676 772 aa17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 ANKRD1Q15327 319 aa17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 ME3Q16798 604 aa17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-212ENST00000559974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 ZSCAN22P10073 491 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 SYT1P21579 422 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 KRT32Q14532 448 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms