RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
APEX1-218ENST00000557344 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
APEX1-218ENST00000557344 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
APEX1-218ENST00000557344 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
APEX1-218ENST00000557344 TAF1P21675 1872 aa13.22□□□□□ -0.29
APEX1-218ENST00000557344 TBC1D8O95759 1140 aa13.21□□□□□ -0.29
APEX1-218ENST00000557344 RIPK4P57078 832 aa13.21□□□□□ -0.29
APEX1-218ENST00000557344 FKBP1BP68106 108 aa13.21□□□□□ -0.29
APEX1-218ENST00000557344 GPSM2P81274 684 aa13.21□□□□□ -0.29
APEX1-218ENST00000557344 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
APEX1-218ENST00000557344 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
APEX1-218ENST00000557344 ZNF280AP59817 542 aaPredicted RBP13.2□□□□□ -0.3
APEX1-218ENST00000557344 AIMP1Q12904 312 aaKnown RBP13.2□□□□□ -0.3
APEX1-218ENST00000557344 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
APEX1-218ENST00000557344 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
APEX1-218ENST00000557344 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
APEX1-218ENST00000557344 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
APEX1-218ENST00000557344 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
APEX1-218ENST00000557344 EYA3Q99504 573 aa13.2□□□□□ -0.3
APEX1-218ENST00000557344 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
APEX1-218ENST00000557344 SCARF1Q14162 830 aa13.19□□□□□ -0.3
APEX1-218ENST00000557344 FBXO46Q6PJ61 603 aaPredicted RBP13.19□□□□□ -0.3
APEX1-218ENST00000557344 TBC1D16Q8TBP0 767 aa13.19□□□□□ -0.3
APEX1-218ENST00000557344 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
APEX1-218ENST00000557344 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
APEX1-218ENST00000557344 GPR25O00155 361 aa13.18□□□□□ -0.3
APEX1-218ENST00000557344 TM4SF4P48230 202 aa13.18□□□□□ -0.3
APEX1-218ENST00000557344 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
APEX1-218ENST00000557344 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
APEX1-218ENST00000557344 MOB2Q70IA6 237 aa13.18□□□□□ -0.3
APEX1-218ENST00000557344 ZC3H12CQ9C0D7 883 aaKnown RBP13.18□□□□□ -0.3
APEX1-218ENST00000557344 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
APEX1-218ENST00000557344 ZNF609O15014 1411 aa13.17□□□□□ -0.3
APEX1-218ENST00000557344 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
APEX1-218ENST00000557344 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
APEX1-218ENST00000557344 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
APEX1-218ENST00000557344 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
APEX1-218ENST00000557344 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 COL4A1P02462 1669 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
APEX1-218ENST00000557344 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 RPS8P62241 208 aaKnown RBP13.16□□□□□ -0.3
APEX1-218ENST00000557344 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
APEX1-218ENST00000557344 NECTIN2Q92692 538 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 GMLQ99445 158 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
APEX1-218ENST00000557344 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
APEX1-218ENST00000557344 NEUROD2Q15784 382 aa13.15□□□□□ -0.3
APEX1-218ENST00000557344 CCDC184Q52MB2 194 aa13.15□□□□□ -0.3
APEX1-218ENST00000557344 ISCA1Q9BUE6 129 aa13.15□□□□□ -0.3
APEX1-218ENST00000557344 CFHR5Q9BXR6 569 aa13.15□□□□□ -0.3
APEX1-218ENST00000557344 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
APEX1-218ENST00000557344 G3V3G9 751 aa13.14□□□□□ -0.31
APEX1-218ENST00000557344 FKTNO75072 461 aa13.14□□□□□ -0.31
APEX1-218ENST00000557344 USP17L8P0C7I0 530 aa13.14□□□□□ -0.31
APEX1-218ENST00000557344 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
APEX1-218ENST00000557344 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
APEX1-218ENST00000557344 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
APEX1-218ENST00000557344 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
APEX1-218ENST00000557344 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
APEX1-218ENST00000557344 CHL1O00533 1208 aa13.13□□□□□ -0.31
APEX1-218ENST00000557344 UFL1O94874 794 aa13.13□□□□□ -0.31
APEX1-218ENST00000557344 PRAMEF18Q5VWM3 479 aa13.13□□□□□ -0.31
APEX1-218ENST00000557344 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
APEX1-218ENST00000557344 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
APEX1-218ENST00000557344 IRS4O14654 1257 aaPredicted RBP13.12□□□□□ -0.31
APEX1-218ENST00000557344 SREBF2Q12772 1141 aa13.12□□□□□ -0.31
APEX1-218ENST00000557344 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
APEX1-218ENST00000557344 RTL5Q5HYW3 569 aaPredicted RBP13.12□□□□□ -0.31
APEX1-218ENST00000557344 CHPF2Q9P2E5 772 aa13.12□□□□□ -0.31
APEX1-218ENST00000557344 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
APEX1-218ENST00000557344 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
APEX1-218ENST00000557344 APAF1O14727 1248 aa13.11□□□□□ -0.31
APEX1-218ENST00000557344 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
APEX1-218ENST00000557344 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
APEX1-218ENST00000557344 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
APEX1-218ENST00000557344 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
APEX1-218ENST00000557344 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
APEX1-218ENST00000557344 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
APEX1-218ENST00000557344 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
APEX1-218ENST00000557344 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
APEX1-218ENST00000557344 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
APEX1-218ENST00000557344 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
APEX1-218ENST00000557344 PODNQ7Z5L7 613 aa13.1□□□□□ -0.31
APEX1-218ENST00000557344 NF2P35240 595 aa13.09□□□□□ -0.31
APEX1-218ENST00000557344 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
APEX1-218ENST00000557344 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
APEX1-218ENST00000557344 PSME4Q14997 1843 aa13.09□□□□□ -0.31
APEX1-218ENST00000557344 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.31
APEX1-218ENST00000557344 WNT10BO00744 389 aa13.08□□□□□ -0.32
APEX1-218ENST00000557344 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
APEX1-218ENST00000557344 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
APEX1-218ENST00000557344 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
APEX1-218ENST00000557344 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
APEX1-218ENST00000557344 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
APEX1-218ENST00000557344 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
APEX1-218ENST00000557344 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.32
APEX1-218ENST00000557344 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms