RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 ASXL1Q8IXJ9 1541 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 MRPS27Q92552 414 aaKnown RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 USP37Q86T82 979 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 INPP5BP32019 993 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 MTRF1LQ9UGC7 380 aaKnown RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 NCOA1Q15788 1441 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
SPTB-208ENST00000556626 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
SPTB-208ENST00000556626 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPTB-208ENST00000556626 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 CEP120Q8N960 986 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
SPTB-208ENST00000556626 SKAP1Q86WV1 359 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 PSMA7O14818 248 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 DNAJC25Q9H1X3 360 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 GUCA1BQ9UMX6 200 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
SPTB-208ENST00000556626 LZTFL1Q9NQ48 299 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
SPTB-208ENST00000556626 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 TPD52P55327 224 aaPredicted RBP12.3□□□□□ -0.44
SPTB-208ENST00000556626 MFSD6Q6ZSS7 791 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
SPTB-208ENST00000556626 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
SPTB-208ENST00000556626 MAP3K1Q13233 1512 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 CEP128Q6ZU80 1094 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 SMC1BQ8NDV3 1235 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 IDEP14735 1019 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 UBXN1Q04323 297 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 HDAC1Q13547 482 aaPredicted RBP12.29□□□□□ -0.44
SPTB-208ENST00000556626 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
SPTB-208ENST00000556626 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
SPTB-208ENST00000556626 NESP48681 1621 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 USP16Q9Y5T5 823 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 TNNC1P63316 161 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 TUBB2AQ13885 445 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 CCDC42Q96M95 316 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 TUBB2BQ9BVA1 445 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 STARD3NLO95772 234 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 CEP85LQ5SZL2 805 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 DACT1Q9NYF0 836 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
SPTB-208ENST00000556626 ZNF444Q8N0Y2 327 aaPredicted RBP12.29□□□□□ -0.44
SPTB-208ENST00000556626 ORC3Q9UBD5 711 aaPredicted RBP12.29□□□□□ -0.44
SPTB-208ENST00000556626 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 HSP90AA4PQ58FG1 418 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 MYRIPQ8NFW9 859 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 TBCAO75347 108 aaKnown RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 ZNF853P0CG23 659 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 RPUSD2Q8IZ73 545 aaKnown RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 VCXQ9H320 206 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 F13A1P00488 732 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 PDE4BQ07343 736 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 CCDC14Q49A88 953 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 MAP2K2P36507 400 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 AFMP43652 599 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 ZNF569Q5MCW4 686 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 RNF168Q8IYW5 571 aaPredicted RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 SLC26A6Q9BXS9 759 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 SLC5A1P13866 664 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 GBP7Q8N8V2 638 aaPredicted RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 EVCP57679 992 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 ARID4AP29374 1257 aaPredicted RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 HPDP32754 393 aaPredicted RBP12.28□□□□□ -0.44
SPTB-208ENST00000556626 FYB2Q5VWT5 728 aa12.28□□□□□ -0.44
SPTB-208ENST00000556626 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.44
SPTB-208ENST00000556626 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.44
SPTB-208ENST00000556626 PSMD1Q99460 953 aa12.27□□□□□ -0.44
SPTB-208ENST00000556626 ERMNQ8TAM6 284 aa12.27□□□□□ -0.44
SPTB-208ENST00000556626 NKIRAS1Q9NYS0 192 aa12.27□□□□□ -0.44
SPTB-208ENST00000556626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.44
SPTB-208ENST00000556626 IGSF3O75054 1194 aa12.27□□□□□ -0.45
SPTB-208ENST00000556626 ARL1P40616 181 aaPredicted RBP12.27□□□□□ -0.45
SPTB-208ENST00000556626 PPP1R7Q15435 360 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms