RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 MKRN3Q13064 507 aaKnown RBP17.65■□□□□ 0.42
ABCD4-224ENST00000556119 OTOP1Q7RTM1 612 aa17.65■□□□□ 0.42
ABCD4-224ENST00000556119 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
ABCD4-224ENST00000556119 NSFL1CQ9UNZ2 370 aaKnown RBP17.65■□□□□ 0.42
ABCD4-224ENST00000556119 SCAF8Q9UPN6 1271 aaKnown RBP17.65■□□□□ 0.42
ABCD4-224ENST00000556119 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
ABCD4-224ENST00000556119 ZNF280AP59817 542 aaPredicted RBP17.64■□□□□ 0.41
ABCD4-224ENST00000556119 SLC17A8Q8NDX2 589 aa17.64■□□□□ 0.41
ABCD4-224ENST00000556119 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
ABCD4-224ENST00000556119 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
ABCD4-224ENST00000556119 SREBF2Q12772 1141 aa17.63■□□□□ 0.41
ABCD4-224ENST00000556119 PRAMEF18Q5VWM3 479 aa17.63■□□□□ 0.41
ABCD4-224ENST00000556119 OTUD5Q96G74 571 aa17.63■□□□□ 0.41
ABCD4-224ENST00000556119 EIF4A1P60842 406 aaKnown RBP17.62■□□□□ 0.41
ABCD4-224ENST00000556119 GPSM2P81274 684 aa17.62■□□□□ 0.41
ABCD4-224ENST00000556119 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
ABCD4-224ENST00000556119 PSME4Q14997 1843 aa17.62■□□□□ 0.41
ABCD4-224ENST00000556119 COL4A1P02462 1669 aa17.61■□□□□ 0.41
ABCD4-224ENST00000556119 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
ABCD4-224ENST00000556119 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
ABCD4-224ENST00000556119 PTPN22Q9Y2R2 807 aa17.61■□□□□ 0.41
ABCD4-224ENST00000556119 PITPNM2Q9BZ72 1349 aa17.61■□□□□ 0.41
ABCD4-224ENST00000556119 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
ABCD4-224ENST00000556119 TTLL12Q14166 644 aaPredicted RBP17.6■□□□□ 0.41
ABCD4-224ENST00000556119 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
ABCD4-224ENST00000556119 ARMC5Q96C12 935 aa17.6■□□□□ 0.41
ABCD4-224ENST00000556119 H0YGN5 161 aa17.59■□□□□ 0.41
ABCD4-224ENST00000556119 PDIA6Q15084 440 aa17.59■□□□□ 0.41
ABCD4-224ENST00000556119 TBC1D16Q8TBP0 767 aa17.59■□□□□ 0.41
ABCD4-224ENST00000556119 EYA3Q99504 573 aa17.59■□□□□ 0.41
ABCD4-224ENST00000556119 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
ABCD4-224ENST00000556119 LAMA3Q16787 3333 aa17.59■□□□□ 0.41
ABCD4-224ENST00000556119 ZNF609O15014 1411 aa17.58■□□□□ 0.41
ABCD4-224ENST00000556119 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.4
ABCD4-224ENST00000556119 RSBN1LQ6PCB5 846 aaPredicted RBP17.58■□□□□ 0.4
ABCD4-224ENST00000556119 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.4
ABCD4-224ENST00000556119 GMLQ99445 158 aa17.58■□□□□ 0.4
ABCD4-224ENST00000556119 MYOZ2Q9NPC6 264 aa17.58■□□□□ 0.4
ABCD4-224ENST00000556119 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
ABCD4-224ENST00000556119 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
ABCD4-224ENST00000556119 ALDH1A1P00352 501 aa17.57■□□□□ 0.4
ABCD4-224ENST00000556119 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
ABCD4-224ENST00000556119 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
ABCD4-224ENST00000556119 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
ABCD4-224ENST00000556119 NBPF9Q3BBW0 867 aa17.56■□□□□ 0.4
ABCD4-224ENST00000556119 SPRYD7Q5W111 196 aa17.56■□□□□ 0.4
ABCD4-224ENST00000556119 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
ABCD4-224ENST00000556119 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
ABCD4-224ENST00000556119 ANXA1P04083 346 aa17.55■□□□□ 0.4
ABCD4-224ENST00000556119 PROSER3Q2NL68 480 aa17.55■□□□□ 0.4
ABCD4-224ENST00000556119 CHRDL2Q6WN34 429 aa17.55■□□□□ 0.4
ABCD4-224ENST00000556119 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
ABCD4-224ENST00000556119 TMEM106CQ9BVX2 250 aa17.55■□□□□ 0.4
ABCD4-224ENST00000556119 LAMB1P07942 1786 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-224ENST00000556119 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
ABCD4-224ENST00000556119 CAP1Q01518 475 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 IFNL1Q8IU54 200 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
ABCD4-224ENST00000556119 INHBEP58166 350 aa17.53■□□□□ 0.4
ABCD4-224ENST00000556119 PRKG1Q13976 671 aa17.53■□□□□ 0.4
ABCD4-224ENST00000556119 SF3B3Q15393 1217 aaKnown RBP17.53■□□□□ 0.4
ABCD4-224ENST00000556119 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
ABCD4-224ENST00000556119 ERO1AQ96HE7 468 aa17.53■□□□□ 0.4
ABCD4-224ENST00000556119 ZNF333Q96JL9 665 aa17.53■□□□□ 0.4
ABCD4-224ENST00000556119 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
ABCD4-224ENST00000556119 G3V3G9 751 aa17.52■□□□□ 0.4
ABCD4-224ENST00000556119 IGF2BP3O00425 579 aaKnown RBP eCLIP17.52■□□□□ 0.4
ABCD4-224ENST00000556119 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
ABCD4-224ENST00000556119 EFCC1Q9HA90 598 aa17.52■□□□□ 0.4
ABCD4-224ENST00000556119 PODXL2Q9NZ53 605 aa17.52■□□□□ 0.4
ABCD4-224ENST00000556119 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
ABCD4-224ENST00000556119 MANSC4A6NHS7 340 aaPredicted RBP17.51■□□□□ 0.39
ABCD4-224ENST00000556119 EIF2S2P20042 333 aaKnown RBP17.51■□□□□ 0.39
ABCD4-224ENST00000556119 NF2P35240 595 aa17.51■□□□□ 0.39
ABCD4-224ENST00000556119 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
ABCD4-224ENST00000556119 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
ABCD4-224ENST00000556119 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
ABCD4-224ENST00000556119 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
ABCD4-224ENST00000556119 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
ABCD4-224ENST00000556119 FZD1Q9UP38 647 aa17.5■□□□□ 0.39
ABCD4-224ENST00000556119 WNT10BO00744 389 aa17.49■□□□□ 0.39
ABCD4-224ENST00000556119 UFL1O94874 794 aa17.49■□□□□ 0.39
ABCD4-224ENST00000556119 FAM89AQ96GI7 184 aa17.49■□□□□ 0.39
ABCD4-224ENST00000556119 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-224ENST00000556119 USP17L3A6NCW0 530 aa17.48■□□□□ 0.39
ABCD4-224ENST00000556119 USP17L4A6NCW7 530 aa17.48■□□□□ 0.39
ABCD4-224ENST00000556119 CRHR2Q13324 411 aa17.48■□□□□ 0.39
ABCD4-224ENST00000556119 USP17L1Q7RTZ2 530 aa17.48■□□□□ 0.39
ABCD4-224ENST00000556119 XAGE3Q8WTP9 111 aa17.48■□□□□ 0.39
ABCD4-224ENST00000556119 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
ABCD4-224ENST00000556119 ANGEL1Q9UNK9 670 aaKnown RBP17.48■□□□□ 0.39
ABCD4-224ENST00000556119 SP3Q02447 781 aa17.47■□□□□ 0.39
ABCD4-224ENST00000556119 SLC10A4Q96EP9 437 aa17.47■□□□□ 0.39
ABCD4-224ENST00000556119 GGA1Q9UJY5 639 aa17.47■□□□□ 0.39
ABCD4-224ENST00000556119 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
ABCD4-224ENST00000556119 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms