RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SEPT3Q9UH03 358 aa2.9□□□□□ -1.94
PRPF39-208ENST00000554785 A0A0A0MRY4 1105 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 XYLBO75191 536 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 MAP3K6O95382 1288 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 ELNP15502 786 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 SELPP16109 830 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 RAC1P63000 192 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 TRAPPC3LQ5T215 181 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 C16orf46Q6P387 395 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 DMRTC2Q8IXT2 367 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-208ENST00000554785 TRPM4Q8TD43 1214 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 PBXIP1Q96AQ6 731 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 CCDC97Q96F63 343 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-208ENST00000554785 SERPINA10Q9UK55 444 aa2.9□□□□□ -1.95
PRPF39-208ENST00000554785 J3QW42 95 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 HYAL3O43820 417 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-208ENST00000554785 MMP20O60882 483 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 RARAP10276 462 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 ADGRE1Q14246 886 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 TXNRD3Q86VQ6 643 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 LENG1Q96BZ8 264 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-208ENST00000554785 RNF112Q9ULX5 631 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-208ENST00000554785 RGS9O75916 674 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-208ENST00000554785 EGFRP00533 1210 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 EPB42P16452 691 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 ADAMTSL4Q6UY14 1074 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 ATCAYQ86WG3 371 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 HOMEZQ8IX15 550 aa2.89□□□□□ -1.95
PRPF39-208ENST00000554785 CLP1Q92989 425 aaKnown RBP2.89□□□□□ -1.95
PRPF39-208ENST00000554785 COL13A1Q5TAT6 717 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-208ENST00000554785 DCAF11Q8TEB1 546 aa2.88□□□□□ -1.95
PRPF39-208ENST00000554785 COL26A1Q96A83 441 aa2.88□□□□□ -1.95
PRPF39-208ENST00000554785 NSUN5Q96P11 429 aaKnown RBP2.88□□□□□ -1.95
PRPF39-208ENST00000554785 TLR7Q9NYK1 1049 aaKnown RBP2.88□□□□□ -1.95
PRPF39-208ENST00000554785 ABCC9O60706 1549 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 TMEM88BA6NKF7 163 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 DEAF1O75398 565 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-208ENST00000554785 ATP2B4P23634 1241 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 BRD2P25440 801 aaKnown RBP2.87□□□□□ -1.95
PRPF39-208ENST00000554785 GPLD1P80108 840 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 MTMR3Q13615 1198 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 MSL1Q68DK7 614 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 FMR1NBQ8N0W7 255 aaPredicted RBP2.87□□□□□ -1.95
PRPF39-208ENST00000554785 DTWD1Q8N5C7 304 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 GPR152Q8TDT2 470 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 SMG9Q9H0W8 520 aaKnown RBP2.87□□□□□ -1.95
PRPF39-208ENST00000554785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.87□□□□□ -1.95
PRPF39-208ENST00000554785 LOC102724428A0A0B4J2F2 783 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 ZAP70P43403 619 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 NRLP54845 237 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 SIK1P57059 783 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 MBTPS1Q14703 1052 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 PCSK7Q16549 785 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 PHLDB3Q6NSJ2 640 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 ELMSAN1Q6PJG2 1045 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 C11orf16Q9NQ32 467 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 STIM2Q9P246 746 aa2.87□□□□□ -1.95
PRPF39-208ENST00000554785 NISCHQ9Y2I1 1504 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 CYP2E1P05181 493 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-208ENST00000554785 EIF2AK2P19525 551 aaKnown RBP2.86□□□□□ -1.95
PRPF39-208ENST00000554785 PLD4Q96BZ4 506 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 A6NHS1 94 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 UBAP1LF5GYI3 381 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 PTCD1O75127 700 aaKnown RBP2.86□□□□□ -1.95
PRPF39-208ENST00000554785 GDF6Q6KF10 455 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-208ENST00000554785 NLRP13Q86W25 1043 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 WDR26Q9H7D7 661 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 FRRS1LQ9P0K9 344 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 TMEM63CQ9P1W3 806 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 TRIM33Q9UPN9 1127 aa2.86□□□□□ -1.95
PRPF39-208ENST00000554785 GSC2O15499 205 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 SSFA2P28290 1259 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 SOX18P35713 384 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 ATP11AP98196 1134 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 FBXO11Q86XK2 927 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 OR13H1Q8NG92 308 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 PIK3R5Q8WYR1 880 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 TTC9Q92623 222 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 NUDT16Q96DE0 195 aaKnown RBP2.85□□□□□ -1.95
PRPF39-208ENST00000554785 GGNBP2Q9H3C7 697 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 CNTN3Q9P232 1028 aa2.85□□□□□ -1.95
PRPF39-208ENST00000554785 ALX3O95076 343 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 PSAPP07602 524 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 HOXD8P13378 290 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-208ENST00000554785 ACPPP15309 386 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 SETDB1Q15047 1291 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 WFDC8Q8IUA0 241 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 IL22RA1Q8N6P7 574 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 GTF3C2Q8WUA4 911 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-208ENST00000554785 TP53INP1Q96A56 240 aa2.84□□□□□ -1.95
PRPF39-208ENST00000554785 SSBP4Q9BWG4 385 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-208ENST00000554785 DLL1O00548 723 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 TM4SF5O14894 197 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 TRPA1O75762 1119 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 PPP1R15AO75807 674 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-208ENST00000554785 MPSTP25325 297 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 NOS3P29474 1203 aa2.84□□□□□ -1.96
PRPF39-208ENST00000554785 IREB2P48200 963 aaKnown RBP2.84□□□□□ -1.96
PRPF39-208ENST00000554785 IRAK1P51617 712 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms