RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 JPH1Q9HDC5 661 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-213ENST00000554776 ABI2Q9NYB9 513 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-213ENST00000554776 LOC102724428A0A0B4J2F2 783 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 A6NHS1 94 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 SOWAHDA6NJG2 315 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 PATL2C9JE40 543 aaKnown RBP5.68□□□□□ -1.5
SCFD1-213ENST00000554776 RGS9O75916 674 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-213ENST00000554776 EIF2AK2P19525 551 aaKnown RBP5.68□□□□□ -1.5
SCFD1-213ENST00000554776 USP5P45974 858 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 AFF1P51825 1210 aaKnown RBP5.68□□□□□ -1.5
SCFD1-213ENST00000554776 SIK1P57059 783 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 AAMPQ13685 434 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 GRIK5Q16478 980 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 TTC39BQ5VTQ0 682 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-213ENST00000554776 HFE2Q6ZVN8 426 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 GJD3Q8N144 294 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 KCTD17Q8N5Z5 321 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 NSUN5Q96P11 429 aaKnown RBP5.68□□□□□ -1.5
SCFD1-213ENST00000554776 CCDC87Q9NVE4 849 aa5.68□□□□□ -1.5
SCFD1-213ENST00000554776 J3QW42 95 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 KIF4AO95239 1232 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 EHHADHQ08426 723 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 C8orf34Q49A92 452 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-213ENST00000554776 ELMSAN1Q6PJG2 1045 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 ILDR2Q71H61 639 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 TTC16Q8NEE8 873 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 CNTN3Q9P232 1028 aa5.67□□□□□ -1.5
SCFD1-213ENST00000554776 KRBA1A5PL33 1030 aa5.66□□□□□ -1.5
SCFD1-213ENST00000554776 SPDYE3A6NKU9 549 aa5.66□□□□□ -1.5
SCFD1-213ENST00000554776 GHRHP01286 108 aa5.66□□□□□ -1.5
SCFD1-213ENST00000554776 CYP2E1P05181 493 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-213ENST00000554776 HYAL2Q12891 473 aa5.66□□□□□ -1.5
SCFD1-213ENST00000554776 AEBP1Q8IUX7 1158 aa5.66□□□□□ -1.5
SCFD1-213ENST00000554776 PLD4Q96BZ4 506 aa5.66□□□□□ -1.5
SCFD1-213ENST00000554776 SMG9Q9H0W8 520 aaKnown RBP5.66□□□□□ -1.5
SCFD1-213ENST00000554776 C1orf127Q8N9H9 656 aa5.65□□□□□ -1.5
SCFD1-213ENST00000554776 RBSNQ9H1K0 784 aa5.65□□□□□ -1.5
SCFD1-213ENST00000554776 CHRDQ9H2X0 955 aa5.65□□□□□ -1.5
SCFD1-213ENST00000554776 BRPF3Q9ULD4 1205 aa5.65□□□□□ -1.5
SCFD1-213ENST00000554776 TNFRSF21O75509 655 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 ITGB2P05107 769 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 SPATA31C1P0DKV0 1188 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 PLA2G4EQ3MJ16 856 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 MSL1Q68DK7 614 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 CEP120Q8N960 986 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 SNX29Q8TEQ0 813 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 PMEPA1Q969W9 287 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 KANSL3Q9P2N6 904 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 SALL4Q9UJQ4 1053 aa5.64□□□□□ -1.51
SCFD1-213ENST00000554776 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-213ENST00000554776 A0A0A0MRY4 1105 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 NDUFB5O43674 189 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 CES1P23141 567 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 ATP11AP98196 1134 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 PRRT3Q5FWE3 981 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 TRAPPC3LQ5T215 181 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 SPACA7Q96KW9 195 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 CITED4Q96RK1 184 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 FAM129BQ96TA1 746 aa5.63□□□□□ -1.51
SCFD1-213ENST00000554776 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-213ENST00000554776 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 PHACTR2O75167 634 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 BAG6P46379 1132 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 TRIM28Q13263 835 aaKnown RBP5.62□□□□□ -1.51
SCFD1-213ENST00000554776 NCAPG2Q86XI2 1143 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 WFDC8Q8IUA0 241 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 DMRTC2Q8IXT2 367 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-213ENST00000554776 DTWD1Q8N5C7 304 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 RASSF4Q9H2L5 321 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 TRIM33Q9UPN9 1127 aa5.62□□□□□ -1.51
SCFD1-213ENST00000554776 EREGO14944 169 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 SMNDC1O75940 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCFD1-213ENST00000554776 IGHA1P01876 353 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 IGHA2P01877 340 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 RAC1P63000 192 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 PDE3BQ13370 1112 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 GDF6Q6KF10 455 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-213ENST00000554776 SND1Q7KZF4 910 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCFD1-213ENST00000554776 FMR1NBQ8N0W7 255 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-213ENST00000554776 CACTIN-AS1Q8N1I8 211 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 PBX4Q9BYU1 374 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 ZFYVE28Q9HCC9 887 aa5.61□□□□□ -1.51
SCFD1-213ENST00000554776 C1QTNF9BB2RNN3 333 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 NFKBIEO00221 500 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 ACPPP15309 386 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 ELNP15502 786 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 CHRNA4P43681 627 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 CEP135Q66GS9 1140 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 GPAT2Q6NUI2 795 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 CD163Q86VB7 1156 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 IL22RA1Q8N6P7 574 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 RBCK1Q9BYM8 510 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 BIN2Q9UBW5 565 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-213ENST00000554776 AMOTL2Q9Y2J4 779 aa5.6□□□□□ -1.51
SCFD1-213ENST00000554776 ZBTB7CA1YPR0 619 aa5.59□□□□□ -1.51
SCFD1-213ENST00000554776 GPR182O15218 404 aa5.59□□□□□ -1.51
SCFD1-213ENST00000554776 PROCP04070 461 aa5.59□□□□□ -1.51
SCFD1-213ENST00000554776 EDN3P14138 238 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms