RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 ZMYM1Q5SVZ6 1142 aa21.41■■□□□ 1.02
MEG3-224ENST00000554639 TTLL11Q8NHH1 800 aa21.41■■□□□ 1.02
MEG3-224ENST00000554639 EDC3Q96F86 508 aaKnown RBP21.41■■□□□ 1.02
MEG3-224ENST00000554639 ZNF512BQ96KM6 892 aaPredicted RBP21.41■■□□□ 1.02
MEG3-224ENST00000554639 CCDC87Q9NVE4 849 aa21.41■■□□□ 1.02
MEG3-224ENST00000554639 HMGB1P09429 215 aaKnown RBP21.41■■□□□ 1.02
MEG3-224ENST00000554639 PUS3Q9BZE2 481 aaKnown RBP21.41■■□□□ 1.02
MEG3-224ENST00000554639 ATP6V1DQ9Y5K8 247 aa21.41■■□□□ 1.02
MEG3-224ENST00000554639 IRS4O14654 1257 aaPredicted RBP21.4■■□□□ 1.02
MEG3-224ENST00000554639 DDX46Q7L014 1031 aaKnown RBP21.4■■□□□ 1.02
MEG3-224ENST00000554639 TRMT112Q9UI30 125 aaKnown RBP21.4■■□□□ 1.02
MEG3-224ENST00000554639 RIPOR2Q9Y4F9 1068 aa21.4■■□□□ 1.02
MEG3-224ENST00000554639 GOLIM4O00461 696 aa21.39■■□□□ 1.01
MEG3-224ENST00000554639 RGL2O15211 777 aa21.39■■□□□ 1.01
MEG3-224ENST00000554639 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
MEG3-224ENST00000554639 ARXQ96QS3 562 aa21.39■■□□□ 1.01
MEG3-224ENST00000554639 RNF113AO15541 343 aaKnown RBP21.38■■□□□ 1.01
MEG3-224ENST00000554639 TTC39AQ5SRH9 613 aa21.38■■□□□ 1.01
MEG3-224ENST00000554639 GORABQ5T7V8 394 aa21.38■■□□□ 1.01
MEG3-224ENST00000554639 MARCH10Q8NA82 808 aaPredicted RBP21.38■■□□□ 1.01
MEG3-224ENST00000554639 LRP5O75197 1615 aa21.38■■□□□ 1.01
MEG3-224ENST00000554639 ITGA6P23229 1130 aa21.38■■□□□ 1.01
MEG3-224ENST00000554639 ZNF445P59923 1031 aa21.38■■□□□ 1.01
MEG3-224ENST00000554639 INTS5Q6P9B9 1019 aaKnown RBP21.38■■□□□ 1.01
MEG3-224ENST00000554639 XAGE2Q96GT9 111 aa21.38■■□□□ 1.01
MEG3-224ENST00000554639 RIC1Q4ADV7 1423 aa21.37■■□□□ 1.01
MEG3-224ENST00000554639 LOC102724428A0A0B4J2F2 783 aa21.37■■□□□ 1.01
MEG3-224ENST00000554639 ZSCAN22P10073 491 aaPredicted RBP21.37■■□□□ 1.01
MEG3-224ENST00000554639 SIK1P57059 783 aa21.37■■□□□ 1.01
MEG3-224ENST00000554639 LDHAL6AQ6ZMR3 332 aa21.37■■□□□ 1.01
MEG3-224ENST00000554639 NEK1Q96PY6 1258 aa21.37■■□□□ 1.01
MEG3-224ENST00000554639 STX6O43752 255 aa21.36■■□□□ 1.01
MEG3-224ENST00000554639 PRPF40AO75400 957 aaKnown RBP21.36■■□□□ 1.01
MEG3-224ENST00000554639 GPTP24298 496 aa21.36■■□□□ 1.01
MEG3-224ENST00000554639 TMEM87AQ8NBN3 555 aa21.36■■□□□ 1.01
MEG3-224ENST00000554639 GRPEL1Q9HAV7 217 aa21.36■■□□□ 1.01
MEG3-224ENST00000554639 XRCC6P12956 609 aaKnown RBP eCLIP21.35■■□□□ 1.01
MEG3-224ENST00000554639 PDCP20941 246 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 ATP6V1AP38606 617 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 ATP2B3Q16720 1220 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 METTL24Q5JXM2 366 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 KLHL34Q8N239 644 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 CPA1P15085 419 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
MEG3-224ENST00000554639 CHMP4CQ96CF2 233 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 GREM2Q9H772 168 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
MEG3-224ENST00000554639 MROH5Q6ZUA9 1318 aa21.34■■□□□ 1.01
MEG3-224ENST00000554639 RTL9Q8NET4 1388 aa21.34■■□□□ 1.01
MEG3-224ENST00000554639 SYT1P21579 422 aa21.34■■□□□ 1.01
MEG3-224ENST00000554639 ME3Q16798 604 aa21.34■■□□□ 1.01
MEG3-224ENST00000554639 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
MEG3-224ENST00000554639 LAMB2P55268 1798 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 TTF1Q15361 905 aaPredicted RBP21.33■■□□□ 1.01
MEG3-224ENST00000554639 CSPP1Q1MSJ5 1256 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 CCDC83Q8IWF9 413 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 CNNM1Q9NRU3 951 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 CTNNA3Q9UI47 895 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 TPCN1Q9ULQ1 816 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 UBN2Q6ZU65 1347 aa21.33■■□□□ 1.01
MEG3-224ENST00000554639 COL5A3P25940 1745 aaPredicted RBP21.33■■□□□ 1
MEG3-224ENST00000554639 LARGE1O95461 756 aa21.32■■□□□ 1
MEG3-224ENST00000554639 NCLP19338 710 aaKnown RBP21.32■■□□□ 1
MEG3-224ENST00000554639 VPS72Q15906 364 aa21.32■■□□□ 1
MEG3-224ENST00000554639 VGLL2Q8N8G2 317 aa21.32■■□□□ 1
MEG3-224ENST00000554639 UTP14AQ9BVJ6 771 aaKnown RBP21.32■■□□□ 1
MEG3-224ENST00000554639 NDUFB9Q9Y6M9 179 aa21.32■■□□□ 1
MEG3-224ENST00000554639 ARAP2Q8WZ64 1704 aa21.32■■□□□ 1
MEG3-224ENST00000554639 NUTM2BA6NNL0 878 aaPredicted RBP21.32■■□□□ 1
MEG3-224ENST00000554639 NUTM2EB1AL46 878 aaPredicted RBP21.32■■□□□ 1
MEG3-224ENST00000554639 PDE8BO95263 885 aa21.32■■□□□ 1
MEG3-224ENST00000554639 CYP21A2P08686 494 aa21.32■■□□□ 1
MEG3-224ENST00000554639 UQCRFS1P1P0C7P4 283 aa21.32■■□□□ 1
MEG3-224ENST00000554639 GJB2P29033 226 aa21.32■■□□□ 1
MEG3-224ENST00000554639 NUTM2AQ8IVF1 878 aaPredicted RBP21.32■■□□□ 1
MEG3-224ENST00000554639 SYAP1Q96A49 352 aaPredicted RBP21.32■■□□□ 1
MEG3-224ENST00000554639 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
MEG3-224ENST00000554639 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.32■■□□□ 1
MEG3-224ENST00000554639 ZNF652Q9Y2D9 606 aa21.32■■□□□ 1
MEG3-224ENST00000554639 CAMTA2O94983 1202 aa21.31■■□□□ 1
MEG3-224ENST00000554639 F13A1P00488 732 aa21.31■■□□□ 1
MEG3-224ENST00000554639 TOB2Q14106 344 aaPredicted RBP21.31■■□□□ 1
MEG3-224ENST00000554639 GLIPR1L2Q4G1C9 344 aa21.31■■□□□ 1
MEG3-224ENST00000554639 CLEC4GQ6UXB4 293 aa21.31■■□□□ 1
MEG3-224ENST00000554639 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
MEG3-224ENST00000554639 MAST3O60307 1309 aa21.31■■□□□ 1
MEG3-224ENST00000554639 APPBP2Q92624 585 aa21.3■■□□□ 1
MEG3-224ENST00000554639 MYH7P12883 1935 aa21.3■■□□□ 1
MEG3-224ENST00000554639 BCORQ6W2J9 1755 aa21.3■■□□□ 1
MEG3-224ENST00000554639 HSPD1P10809 573 aaKnown RBP21.29■■□□□ 1
MEG3-224ENST00000554639 ADORA1P30542 326 aa21.29■■□□□ 1
MEG3-224ENST00000554639 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
MEG3-224ENST00000554639 FBXL16Q8N461 479 aa21.29■■□□□ 1
MEG3-224ENST00000554639 GPT2Q8TD30 523 aa21.29■■□□□ 1
MEG3-224ENST00000554639 FKBP4Q02790 459 aaKnown RBP eCLIP21.29■■□□□ 1
MEG3-224ENST00000554639 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
MEG3-224ENST00000554639 ZSCAN23Q3MJ62 389 aa21.29■■□□□ 1
MEG3-224ENST00000554639 CAVIN1Q6NZI2 390 aaKnown RBP21.29■■□□□ 1
MEG3-224ENST00000554639 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms