RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 C4AP0C0L4 1744 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 HSPA4P34932 840 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 CCDC152Q4G0S7 254 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 PROM2Q8N271 834 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 RUFY2Q8WXA3 655 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 SNRKQ9NRH2 765 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 LRP5O75197 1615 aa23.83■■□□□ 1.41
SSH1-209ENST00000551165 LAMB2P55268 1798 aa23.83■■□□□ 1.4
SSH1-209ENST00000551165 IFIT1P09914 478 aaKnown RBP23.83■■□□□ 1.4
SSH1-209ENST00000551165 TRAPPC3LQ5T215 181 aa23.83■■□□□ 1.4
SSH1-209ENST00000551165 SETDB2Q96T68 719 aa23.83■■□□□ 1.4
SSH1-209ENST00000551165 PDE8BO95263 885 aa23.82■■□□□ 1.4
SSH1-209ENST00000551165 ZNF589Q86UQ0 364 aaPredicted RBP23.82■■□□□ 1.4
SSH1-209ENST00000551165 PAG1Q9NWQ8 432 aa23.82■■□□□ 1.4
SSH1-209ENST00000551165 TAF1P21675 1872 aa23.82■■□□□ 1.4
SSH1-209ENST00000551165 TAF5LO75529 589 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 RFC4P35249 363 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 GORABQ5T7V8 394 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 PI16Q6UXB8 463 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 KIAA1211Q6ZU35 1233 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 RASEFQ8IZ41 740 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 SEC62Q99442 399 aaKnown RBP23.81■■□□□ 1.4
SSH1-209ENST00000551165 FOXD4L1Q9NU39 408 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 SPEF2Q9C093 1822 aa23.81■■□□□ 1.4
SSH1-209ENST00000551165 K7ELQ4 463 aaPredicted RBP23.8■■□□□ 1.4
SSH1-209ENST00000551165 MCCP23508 829 aa23.8■■□□□ 1.4
SSH1-209ENST00000551165 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
SSH1-209ENST00000551165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.8■■□□□ 1.4
SSH1-209ENST00000551165 HIP1O00291 1037 aa23.8■■□□□ 1.4
SSH1-209ENST00000551165 TTC39AQ5SRH9 613 aa23.8■■□□□ 1.4
SSH1-209ENST00000551165 KBTBD3Q8NAB2 608 aa23.8■■□□□ 1.4
SSH1-209ENST00000551165 MPHOSPH8Q99549 860 aa23.8■■□□□ 1.4
SSH1-209ENST00000551165 NBPF5PQ86XG9 351 aaPredicted RBP23.79■■□□□ 1.4
SSH1-209ENST00000551165 RGL2O15211 777 aa23.79■■□□□ 1.4
SSH1-209ENST00000551165 FKBP4Q02790 459 aaKnown RBP eCLIP23.79■■□□□ 1.4
SSH1-209ENST00000551165 CCDC158Q5M9N0 1113 aa23.79■■□□□ 1.4
SSH1-209ENST00000551165 CASZ1Q86V15 1759 aa23.79■■□□□ 1.4
SSH1-209ENST00000551165 NEK4P51957 841 aa23.78■■□□□ 1.4
SSH1-209ENST00000551165 CCDC129Q6ZRS4 1044 aa23.78■■□□□ 1.4
SSH1-209ENST00000551165 UPF3BQ9BZI7 483 aaKnown RBP23.78■■□□□ 1.4
SSH1-209ENST00000551165 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
SSH1-209ENST00000551165 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
SSH1-209ENST00000551165 MED23Q9ULK4 1368 aa23.78■■□□□ 1.4
SSH1-209ENST00000551165 CCDC171Q6TFL3 1326 aa23.78■■□□□ 1.4
SSH1-209ENST00000551165 EPB41L2O43491 1005 aaKnown RBP23.77■■□□□ 1.4
SSH1-209ENST00000551165 ANAPC15P60006 121 aa23.77■■□□□ 1.4
SSH1-209ENST00000551165 COL24A1Q17RW2 1714 aa23.77■■□□□ 1.4
SSH1-209ENST00000551165 MROH5Q6ZUA9 1318 aa23.77■■□□□ 1.4
SSH1-209ENST00000551165 FGFR2P21802 821 aa23.77■■□□□ 1.4
SSH1-209ENST00000551165 SF3B3Q15393 1217 aaKnown RBP23.77■■□□□ 1.4
SSH1-209ENST00000551165 TXNRD1Q16881 649 aa23.77■■□□□ 1.4
SSH1-209ENST00000551165 SLC10A5Q5PT55 438 aa23.77■■□□□ 1.4
SSH1-209ENST00000551165 RGS17Q9UGC6 210 aaPredicted RBP23.77■■□□□ 1.4
SSH1-209ENST00000551165 UBR3Q6ZT12 1888 aa23.76■■□□□ 1.39
SSH1-209ENST00000551165 ZAP70P43403 619 aa23.76■■□□□ 1.39
SSH1-209ENST00000551165 SLC27A3Q5K4L6 730 aa23.76■■□□□ 1.39
SSH1-209ENST00000551165 WTIPA6NIX2 430 aaPredicted RBP23.76■■□□□ 1.39
SSH1-209ENST00000551165 HSP90B1P14625 803 aaKnown RBP23.76■■□□□ 1.39
SSH1-209ENST00000551165 IGHMBP2P38935 993 aaKnown RBP23.76■■□□□ 1.39
SSH1-209ENST00000551165 NFIXQ14938 502 aa23.76■■□□□ 1.39
SSH1-209ENST00000551165 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
SSH1-209ENST00000551165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.76■■□□□ 1.39
SSH1-209ENST00000551165 IL17RAQ96F46 866 aa23.76■■□□□ 1.39
SSH1-209ENST00000551165 MCAMP43121 646 aa23.75■■□□□ 1.39
SSH1-209ENST00000551165 PHKA1P46020 1223 aa23.75■■□□□ 1.39
SSH1-209ENST00000551165 RXRBP28702 533 aa23.74■■□□□ 1.39
SSH1-209ENST00000551165 PUM3Q15397 648 aaKnown RBP23.74■■□□□ 1.39
SSH1-209ENST00000551165 MAP4K1Q92918 833 aa23.74■■□□□ 1.39
SSH1-209ENST00000551165 RBM8AQ9Y5S9 174 aaKnown RBP23.74■■□□□ 1.39
SSH1-209ENST00000551165 CELF1Q92879 486 aaKnown RBP23.74■■□□□ 1.39
SSH1-209ENST00000551165 NYXQ9GZU5 481 aa23.74■■□□□ 1.39
SSH1-209ENST00000551165 ST18O60284 1047 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 CHRNDQ07001 517 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 NECTIN1Q15223 517 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 CCDC102BQ68D86 513 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 TPTE2Q6XPS3 522 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 LPIN2Q92539 896 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 RFX7Q2KHR2 1363 aa23.73■■□□□ 1.39
SSH1-209ENST00000551165 DDIT3P35638 169 aa23.72■■□□□ 1.39
SSH1-209ENST00000551165 TAF6LQ9Y6J9 622 aa23.72■■□□□ 1.39
SSH1-209ENST00000551165 AKAP11Q9UKA4 1901 aa23.72■■□□□ 1.39
SSH1-209ENST00000551165 GYS1P13807 737 aa23.72■■□□□ 1.39
SSH1-209ENST00000551165 CPA1P15085 419 aa23.72■■□□□ 1.39
SSH1-209ENST00000551165 COL9A3Q14050 684 aaPredicted RBP23.72■■□□□ 1.39
SSH1-209ENST00000551165 ADCK5Q3MIX3 580 aa23.72■■□□□ 1.39
SSH1-209ENST00000551165 NOL8Q76FK4 1167 aaKnown RBP23.71■■□□□ 1.39
SSH1-209ENST00000551165 CDC5LQ99459 802 aaKnown RBP23.71■■□□□ 1.39
SSH1-209ENST00000551165 APBA3O96018 575 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 ADRA2BP18089 450 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 NFKBIBQ15653 356 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 MCMDC2Q4G0Z9 681 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 POTEAQ6S8J7 498 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 ANKRD18AQ8IVF6 992 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 NLRP3Q96P20 1036 aa23.71■■□□□ 1.39
SSH1-209ENST00000551165 CREB3L3Q68CJ9 461 aa23.7■■□□□ 1.38
SSH1-209ENST00000551165 TNRC6CQ9HCJ0 1690 aaKnown RBP23.69■■□□□ 1.38
SSH1-209ENST00000551165 HSP90AA1P07900 732 aaKnown RBP23.69■■□□□ 1.38
SSH1-209ENST00000551165 KCNJ4P48050 445 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 SLC51AQ86UW1 340 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 RNF113AO15541 343 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms