RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 SF3B3Q15393 1217 aaKnown RBP23.54■■□□□ 1.36
KRT18-207ENST00000550600 TTC39AQ5SRH9 613 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 KBTBD3Q8NAB2 608 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 XAGE2Q96GT9 111 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 ZNF512BQ96KM6 892 aaPredicted RBP23.54■■□□□ 1.36
KRT18-207ENST00000550600 DNAJC2Q99543 621 aaKnown RBP23.54■■□□□ 1.36
KRT18-207ENST00000550600 BCL2L12Q9HB09 334 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 PAG1Q9NWQ8 432 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 RIC1Q4ADV7 1423 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 LRP5O75197 1615 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 TPTE2Q6XPS3 522 aa23.54■■□□□ 1.36
KRT18-207ENST00000550600 NMIQ13287 307 aaPredicted RBP23.53■■□□□ 1.36
KRT18-207ENST00000550600 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
KRT18-207ENST00000550600 VGLL2Q8N8G2 317 aa23.53■■□□□ 1.36
KRT18-207ENST00000550600 PUM3Q15397 648 aaKnown RBP23.51■■□□□ 1.35
KRT18-207ENST00000550600 LPIN2Q92539 896 aa23.51■■□□□ 1.35
KRT18-207ENST00000550600 ERFEQ4G0M1 354 aa23.51■■□□□ 1.35
KRT18-207ENST00000550600 NBPF5PQ86XG9 351 aaPredicted RBP23.51■■□□□ 1.35
KRT18-207ENST00000550600 IL25Q9H293 177 aa23.51■■□□□ 1.35
KRT18-207ENST00000550600 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
KRT18-207ENST00000550600 TRIM37O94972 964 aa23.5■■□□□ 1.35
KRT18-207ENST00000550600 LRRC4BQ9NT99 713 aa23.5■■□□□ 1.35
KRT18-207ENST00000550600 CCDC171Q6TFL3 1326 aa23.5■■□□□ 1.35
KRT18-207ENST00000550600 UQCRFS1P1P0C7P4 283 aa23.49■■□□□ 1.35
KRT18-207ENST00000550600 SSFA2P28290 1259 aa23.49■■□□□ 1.35
KRT18-207ENST00000550600 NLRP3Q96P20 1036 aa23.49■■□□□ 1.35
KRT18-207ENST00000550600 ANTXR1Q9H6X2 564 aa23.49■■□□□ 1.35
KRT18-207ENST00000550600 SRP68Q9UHB9 627 aaKnown RBP23.49■■□□□ 1.35
KRT18-207ENST00000550600 HSP90AA1P07900 732 aaKnown RBP23.48■■□□□ 1.35
KRT18-207ENST00000550600 SLC5A1P13866 664 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 RXRBP28702 533 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 MAP4K1Q92918 833 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 FAM227BQ96M60 508 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 HELLSQ9NRZ9 838 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 MED23Q9ULK4 1368 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 GOLIM4O00461 696 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 ZFYP08048 801 aaPredicted RBP23.48■■□□□ 1.35
KRT18-207ENST00000550600 MCMDC2Q4G0Z9 681 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 RNF20Q5VTR2 975 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 KCNB2Q92953 911 aa23.48■■□□□ 1.35
KRT18-207ENST00000550600 SLKQ9H2G2 1235 aaPredicted RBP23.48■■□□□ 1.35
KRT18-207ENST00000550600 A0A0D9SFI3 127 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 PLSCR1O15162 318 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 ZKSCAN1P17029 563 aaPredicted RBP23.47■■□□□ 1.35
KRT18-207ENST00000550600 FGFR2P21802 821 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 NEK4P51957 841 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 DDX46Q7L014 1031 aaKnown RBP23.47■■□□□ 1.35
KRT18-207ENST00000550600 ANKRD18AQ8IVF6 992 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 SEC31BQ9NQW1 1179 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 CHMP5Q9NZZ3 219 aa23.47■■□□□ 1.35
KRT18-207ENST00000550600 CIZ1Q9ULV3 898 aaPredicted RBP23.47■■□□□ 1.35
KRT18-207ENST00000550600 ADORA1P30542 326 aa23.46■■□□□ 1.35
KRT18-207ENST00000550600 TTF1Q15361 905 aaPredicted RBP23.46■■□□□ 1.35
KRT18-207ENST00000550600 EDC3Q96F86 508 aaKnown RBP23.46■■□□□ 1.35
KRT18-207ENST00000550600 C4AP0C0L4 1744 aa23.46■■□□□ 1.35
KRT18-207ENST00000550600 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.35
KRT18-207ENST00000550600 KCNJ4P48050 445 aa23.45■■□□□ 1.34
KRT18-207ENST00000550600 PALD1Q9ULE6 856 aa23.45■■□□□ 1.34
KRT18-207ENST00000550600 TM6SF1Q9BZW5 370 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 BSDC1Q9NW68 430 aaPredicted RBP23.44■■□□□ 1.34
KRT18-207ENST00000550600 SNX14Q9Y5W7 946 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 UBR3Q6ZT12 1888 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.44■■□□□ 1.34
KRT18-207ENST00000550600 CD2BP2O95400 341 aaKnown RBP23.44■■□□□ 1.34
KRT18-207ENST00000550600 PTH1RQ03431 593 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 NECTIN1Q15223 517 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 ZSCAN25Q6NSZ9 544 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 HMG20BQ9P0W2 317 aa23.44■■□□□ 1.34
KRT18-207ENST00000550600 ARAP2Q8WZ64 1704 aa23.43■■□□□ 1.34
KRT18-207ENST00000550600 RNF113AO15541 343 aaKnown RBP23.43■■□□□ 1.34
KRT18-207ENST00000550600 PHF14O94880 888 aa23.43■■□□□ 1.34
KRT18-207ENST00000550600 ARID4AP29374 1257 aaPredicted RBP23.43■■□□□ 1.34
KRT18-207ENST00000550600 FKBP4Q02790 459 aaKnown RBP eCLIP23.43■■□□□ 1.34
KRT18-207ENST00000550600 TXNRD1Q16881 649 aa23.43■■□□□ 1.34
KRT18-207ENST00000550600 ZMYM1Q5SVZ6 1142 aa23.42■■□□□ 1.34
KRT18-207ENST00000550600 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.42■■□□□ 1.34
KRT18-207ENST00000550600 RBM8AQ9Y5S9 174 aaKnown RBP23.42■■□□□ 1.34
KRT18-207ENST00000550600 NPHP1O15259 732 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 TAF5LO75529 589 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 NDUFB9Q9Y6M9 179 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 PSMA5P28066 241 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 CCDC102BQ68D86 513 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 SMIM5Q71RC9 77 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 AMIGO3Q86WK7 504 aa23.41■■□□□ 1.34
KRT18-207ENST00000550600 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
KRT18-207ENST00000550600 U3KPZ7 1027 aaPredicted RBP23.41■■□□□ 1.34
KRT18-207ENST00000550600 CHRNDQ07001 517 aa23.4■■□□□ 1.34
KRT18-207ENST00000550600 UBE4AQ14139 1066 aa23.4■■□□□ 1.34
KRT18-207ENST00000550600 TSGA10IPQ3SY00 556 aa23.4■■□□□ 1.34
KRT18-207ENST00000550600 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
KRT18-207ENST00000550600 SPRYD3Q8NCJ5 442 aa23.4■■□□□ 1.34
KRT18-207ENST00000550600 CREB3L3Q68CJ9 461 aa23.39■■□□□ 1.34
KRT18-207ENST00000550600 DDIT3P35638 169 aa23.38■■□□□ 1.33
KRT18-207ENST00000550600 ZAP70P43403 619 aa23.38■■□□□ 1.33
KRT18-207ENST00000550600 RPS8P62241 208 aaKnown RBP23.38■■□□□ 1.33
KRT18-207ENST00000550600 KRT32Q14532 448 aa23.38■■□□□ 1.33
KRT18-207ENST00000550600 NFIXQ14938 502 aa23.38■■□□□ 1.33
KRT18-207ENST00000550600 HELBQ8NG08 1087 aaPredicted RBP23.38■■□□□ 1.33
KRT18-207ENST00000550600 MCAMP43121 646 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms