RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 STOX1Q6ZVD7 989 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 IQSEC3Q9UPP2 1182 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 BIN1O00499 593 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 ATP5JP18859 108 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 TYRO3Q06418 890 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 SCRN1Q12765 414 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 DNAJC10Q8IXB1 793 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 PTGS1P23219 599 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 METTL24Q5JXM2 366 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 FILIP1Q7Z7B0 1213 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 PTPDC1A2A3K4 754 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 AP5Z1O43299 807 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 CCDC158Q5M9N0 1113 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 FER1L4A9Z1Z3 1794 aa16.11■□□□□ 0.17
PRPF40B-209ENST00000548825 BECN2A8MW95 431 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 KDM6AO15550 1401 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 LRMPQ12912 555 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 NRBP1Q9UHY1 535 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 MEGF6O75095 1541 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 SDF4Q9BRK5 362 aa16.1■□□□□ 0.17
PRPF40B-209ENST00000548825 LDHAL6AQ6ZMR3 332 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 GOLGA6L19H0YKK7 550 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 ZNF165P49910 485 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 COL15A1P39059 1388 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 LTN1O94822 1766 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 SCARF1Q14162 830 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 KRT32Q14532 448 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 CCDC186Q7Z3E2 898 aa16.09■□□□□ 0.17
PRPF40B-209ENST00000548825 ZAP70P43403 619 aa16.08■□□□□ 0.17
PRPF40B-209ENST00000548825 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.17
PRPF40B-209ENST00000548825 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.17
PRPF40B-209ENST00000548825 PXDNLA1KZ92 1463 aa16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 TPM2P07951 284 aa16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 HSPD1P10809 573 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 GTF3C6Q969F1 213 aa16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 DENND2AQ9ULE3 1009 aa16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 ZNF609O15014 1411 aa16.08■□□□□ 0.16
PRPF40B-209ENST00000548825 M0R2C6 588 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 EYA2O00167 538 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 IFIT5Q13325 482 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 HAUS7Q99871 368 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 INCENPQ9NQS7 918 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 FAM208AQ9UK61 1670 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 USP42Q9H9J4 1324 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 KIF6Q6ZMV9 814 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 CCAR1Q8IX12 1150 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 OSBP2Q969R2 916 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 HMG20BQ9P0W2 317 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 GOLGA8BA8MQT2 603 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 E7EWF7 191 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
PRPF40B-209ENST00000548825 A0A1B0GVL5 298 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 HSP90AA4PQ58FG1 418 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 DHX32Q7L7V1 743 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 KLF18A0A0U1RQI7 1052 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 NPHP1O15259 732 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 FOXO4P98177 505 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 IL2RBP14784 551 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 IL15P40933 162 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 ACSBG1Q96GR2 724 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
PRPF40B-209ENST00000548825 KINO60870 393 aaKnown RBP16.05■□□□□ 0.16
PRPF40B-209ENST00000548825 MAST3O60307 1309 aa16.05■□□□□ 0.16
PRPF40B-209ENST00000548825 NFAT5O94916 1531 aa16.05■□□□□ 0.16
PRPF40B-209ENST00000548825 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
PRPF40B-209ENST00000548825 STK38Q15208 465 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms