RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PIGBQ92521 554 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
DDX55-209ENST00000542286 ZKSCAN5Q9Y2L8 839 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
DDX55-209ENST00000542286 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
DDX55-209ENST00000542286 SCARF1Q14162 830 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 HLFQ16534 295 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 BRF1Q92994 677 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 LMTK3Q96Q04 1460 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 KCPQ6ZWJ8 1503 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 PSMA5P28066 241 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 MCMDC2Q4G0Z9 681 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 NEK1Q96PY6 1258 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
DDX55-209ENST00000542286 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
DDX55-209ENST00000542286 CAMK4Q16566 473 aa17.54■□□□□ 0.4
DDX55-209ENST00000542286 TTC6Q86TZ1 520 aa17.54■□□□□ 0.4
DDX55-209ENST00000542286 ZSCAN31Q96LW9 406 aaPredicted RBP17.54■□□□□ 0.4
DDX55-209ENST00000542286 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
DDX55-209ENST00000542286 GPHNQ9NQX3 736 aaPredicted RBP17.54■□□□□ 0.4
DDX55-209ENST00000542286 PLCB2Q00722 1185 aa17.54■□□□□ 0.4
DDX55-209ENST00000542286 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
DDX55-209ENST00000542286 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
DDX55-209ENST00000542286 EYA2O00167 538 aa17.53■□□□□ 0.4
DDX55-209ENST00000542286 HAND2P61296 217 aa17.53■□□□□ 0.4
DDX55-209ENST00000542286 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
DDX55-209ENST00000542286 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
DDX55-209ENST00000542286 CCT2P78371 535 aaKnown RBP17.53■□□□□ 0.4
DDX55-209ENST00000542286 FGD1P98174 961 aa17.53■□□□□ 0.4
DDX55-209ENST00000542286 CEBPZQ03701 1054 aaKnown RBP17.53■□□□□ 0.4
DDX55-209ENST00000542286 ZNF830Q96NB3 372 aaPredicted RBP17.53■□□□□ 0.4
DDX55-209ENST00000542286 NCOA5Q9HCD5 579 aaKnown RBP17.53■□□□□ 0.4
DDX55-209ENST00000542286 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
DDX55-209ENST00000542286 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
DDX55-209ENST00000542286 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.4
DDX55-209ENST00000542286 M0R2C6 588 aa17.52■□□□□ 0.4
DDX55-209ENST00000542286 APOBRQ0VD83 1088 aa17.52■□□□□ 0.4
DDX55-209ENST00000542286 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
DDX55-209ENST00000542286 UBE2HP62256 183 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 LIG1P18858 919 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 MCM5P33992 734 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 SASS6Q6UVJ0 657 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 FTOQ9C0B1 505 aaKnown RBP eCLIP17.51■□□□□ 0.39
DDX55-209ENST00000542286 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 TMEM87AQ8NBN3 555 aa17.51■□□□□ 0.39
DDX55-209ENST00000542286 MAST3O60307 1309 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
DDX55-209ENST00000542286 SNAP23O00161 211 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
DDX55-209ENST00000542286 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
DDX55-209ENST00000542286 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 CCDC183Q5T5S1 534 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 OSBP2Q969R2 916 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
DDX55-209ENST00000542286 TJP1Q07157 1748 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 SCRN1Q12765 414 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 ZHX1Q9UKY1 873 aaPredicted RBP17.5■□□□□ 0.39
DDX55-209ENST00000542286 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
DDX55-209ENST00000542286 JCADQ9P266 1359 aa17.49■□□□□ 0.39
DDX55-209ENST00000542286 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
DDX55-209ENST00000542286 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
DDX55-209ENST00000542286 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
DDX55-209ENST00000542286 XAGE2Q96GT9 111 aa17.49■□□□□ 0.39
DDX55-209ENST00000542286 ISCA1Q9BUE6 129 aa17.49■□□□□ 0.39
DDX55-209ENST00000542286 WASHC4Q2M389 1173 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 CKAP2LQ8IYA6 745 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 CEP126Q9P2H0 1117 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
DDX55-209ENST00000542286 GTF3C6Q969F1 213 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 GREM2Q9H772 168 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 CCDC39Q9UFE4 941 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 TOGARAM1Q9Y4F4 1720 aa17.48■□□□□ 0.39
DDX55-209ENST00000542286 KDM4FA0A1W2PPD8 638 aa17.47■□□□□ 0.39
DDX55-209ENST00000542286 ZAP70P43403 619 aa17.47■□□□□ 0.39
DDX55-209ENST00000542286 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
DDX55-209ENST00000542286 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
DDX55-209ENST00000542286 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
DDX55-209ENST00000542286 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
DDX55-209ENST00000542286 PARP4Q9UKK3 1724 aaKnown RBP17.47■□□□□ 0.39
DDX55-209ENST00000542286 AP5Z1O43299 807 aa17.46■□□□□ 0.39
DDX55-209ENST00000542286 PTMAP06454 111 aaKnown RBP17.46■□□□□ 0.39
DDX55-209ENST00000542286 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
DDX55-209ENST00000542286 C17orf53Q8N3J3 647 aaPredicted RBP17.46■□□□□ 0.39
DDX55-209ENST00000542286 NKX2-3Q8TAU0 364 aa17.46■□□□□ 0.39
DDX55-209ENST00000542286 KDM4AO75164 1064 aa17.46■□□□□ 0.39
DDX55-209ENST00000542286 ZMYM1Q5SVZ6 1142 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms