RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TCIRG1Q13488 830 aa15.55■□□□□ 0.08
COPA-205ENST00000541366 KIF4BQ2VIQ3 1234 aa15.55■□□□□ 0.08
COPA-205ENST00000541366 PRPF38BQ5VTL8 546 aaKnown RBP15.55■□□□□ 0.08
COPA-205ENST00000541366 GGA3Q9NZ52 723 aa15.55■□□□□ 0.08
COPA-205ENST00000541366 CDCA5Q96FF9 252 aa15.54■□□□□ 0.08
COPA-205ENST00000541366 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
COPA-205ENST00000541366 DDX60Q8IY21 1712 aaKnown RBP15.54■□□□□ 0.08
COPA-205ENST00000541366 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
COPA-205ENST00000541366 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
COPA-205ENST00000541366 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
COPA-205ENST00000541366 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
COPA-205ENST00000541366 MOB2Q70IA6 237 aa15.53■□□□□ 0.08
COPA-205ENST00000541366 RASAL3Q86YV0 1011 aa15.53■□□□□ 0.08
COPA-205ENST00000541366 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
COPA-205ENST00000541366 SCAF8Q9UPN6 1271 aaKnown RBP15.53■□□□□ 0.08
COPA-205ENST00000541366 MKI67P46013 3256 aaKnown RBP15.53■□□□□ 0.08
COPA-205ENST00000541366 RPS12P25398 132 aaKnown RBP15.52■□□□□ 0.08
COPA-205ENST00000541366 TMC4Q7Z404 712 aa15.52■□□□□ 0.08
COPA-205ENST00000541366 SULF1Q8IWU6 871 aa15.52■□□□□ 0.08
COPA-205ENST00000541366 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
COPA-205ENST00000541366 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
COPA-205ENST00000541366 TBC1D16Q8TBP0 767 aa15.51■□□□□ 0.07
COPA-205ENST00000541366 VIL1P09327 827 aaKnown RBP15.5■□□□□ 0.07
COPA-205ENST00000541366 SCARF1Q14162 830 aa15.5■□□□□ 0.07
COPA-205ENST00000541366 ANGEL2Q5VTE6 544 aaKnown RBP15.5■□□□□ 0.07
COPA-205ENST00000541366 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
COPA-205ENST00000541366 SF3B3Q15393 1217 aaKnown RBP15.49■□□□□ 0.07
COPA-205ENST00000541366 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
COPA-205ENST00000541366 ZNF296Q8WUU4 475 aaPredicted RBP15.49■□□□□ 0.07
COPA-205ENST00000541366 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
COPA-205ENST00000541366 RIPK4P57078 832 aa15.48■□□□□ 0.07
COPA-205ENST00000541366 EYA3Q99504 573 aa15.48■□□□□ 0.07
COPA-205ENST00000541366 CHPF2Q9P2E5 772 aa15.48■□□□□ 0.07
COPA-205ENST00000541366 UBE2Q2LH0YL09 131 aa15.47■□□□□ 0.07
COPA-205ENST00000541366 RPS8P62241 208 aaKnown RBP15.47■□□□□ 0.07
COPA-205ENST00000541366 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
COPA-205ENST00000541366 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
COPA-205ENST00000541366 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
COPA-205ENST00000541366 CENPFP49454 3210 aa15.47■□□□□ 0.07
COPA-205ENST00000541366 UFL1O94874 794 aa15.46■□□□□ 0.07
COPA-205ENST00000541366 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
COPA-205ENST00000541366 MKRN3Q13064 507 aaKnown RBP15.46■□□□□ 0.07
COPA-205ENST00000541366 RSBN1LQ6PCB5 846 aaPredicted RBP15.46■□□□□ 0.07
COPA-205ENST00000541366 R3HDMLQ9H3Y0 253 aa15.46■□□□□ 0.07
COPA-205ENST00000541366 HTTP42858 3142 aa15.46■□□□□ 0.07
COPA-205ENST00000541366 PAPPA2Q9BXP8 1791 aa15.46■□□□□ 0.07
COPA-205ENST00000541366 ANKRD13DQ6ZTN6 518 aa15.45■□□□□ 0.06
COPA-205ENST00000541366 PLBD2Q8NHP8 589 aa15.45■□□□□ 0.06
COPA-205ENST00000541366 WTIPA6NIX2 430 aaPredicted RBP15.44■□□□□ 0.06
COPA-205ENST00000541366 G3V3G9 751 aa15.44■□□□□ 0.06
COPA-205ENST00000541366 IRS4O14654 1257 aaPredicted RBP15.44■□□□□ 0.06
COPA-205ENST00000541366 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
COPA-205ENST00000541366 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
COPA-205ENST00000541366 GMLQ99445 158 aa15.44■□□□□ 0.06
COPA-205ENST00000541366 MYOZ2Q9NPC6 264 aa15.44■□□□□ 0.06
COPA-205ENST00000541366 PODXL2Q9NZ53 605 aa15.44■□□□□ 0.06
COPA-205ENST00000541366 ANKIB1Q9P2G1 1089 aa15.44■□□□□ 0.06
COPA-205ENST00000541366 BRCA2P51587 3418 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 GPR25O00155 361 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 FKBP1BP68106 108 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 PKN2Q16513 984 aaKnown RBP15.43■□□□□ 0.06
COPA-205ENST00000541366 NBPF9Q3BBW0 867 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 AGBL3Q8NEM8 1001 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
COPA-205ENST00000541366 BABAM1Q9NWV8 329 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
COPA-205ENST00000541366 LAS1LQ9Y4W2 734 aaKnown RBP15.43■□□□□ 0.06
COPA-205ENST00000541366 USP17L8P0C7I0 530 aa15.42■□□□□ 0.06
COPA-205ENST00000541366 TMPOP42166 694 aaKnown RBP15.42■□□□□ 0.06
COPA-205ENST00000541366 TTLL12Q14166 644 aaPredicted RBP15.42■□□□□ 0.06
COPA-205ENST00000541366 NEUROD2Q15784 382 aa15.42■□□□□ 0.06
COPA-205ENST00000541366 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
COPA-205ENST00000541366 MXD3Q9BW11 206 aa15.42■□□□□ 0.06
COPA-205ENST00000541366 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
COPA-205ENST00000541366 PSME4Q14997 1843 aa15.41■□□□□ 0.06
COPA-205ENST00000541366 TM4SF4P48230 202 aa15.41■□□□□ 0.06
COPA-205ENST00000541366 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
COPA-205ENST00000541366 FBXO46Q6PJ61 603 aaPredicted RBP15.41■□□□□ 0.06
COPA-205ENST00000541366 CHL1O00533 1208 aa15.4■□□□□ 0.06
COPA-205ENST00000541366 PRKG1Q13976 671 aa15.4■□□□□ 0.06
COPA-205ENST00000541366 ZNF609O15014 1411 aa15.4■□□□□ 0.06
COPA-205ENST00000541366 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
COPA-205ENST00000541366 USP17L3A6NCW0 530 aa15.39■□□□□ 0.05
COPA-205ENST00000541366 USP17L4A6NCW7 530 aa15.39■□□□□ 0.05
COPA-205ENST00000541366 USP17L1Q7RTZ2 530 aa15.39■□□□□ 0.05
COPA-205ENST00000541366 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
COPA-205ENST00000541366 FZD1Q9UP38 647 aa15.39■□□□□ 0.05
COPA-205ENST00000541366 KIAA0100Q14667 2235 aaKnown RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
COPA-205ENST00000541366 FKTNO75072 461 aa15.38■□□□□ 0.05
COPA-205ENST00000541366 PTPN12Q05209 780 aaKnown RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 HABP4Q5JVS0 413 aaKnown RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 DBF4Q9UBU7 674 aaPredicted RBP15.38■□□□□ 0.05
COPA-205ENST00000541366 SASH1O94885 1247 aa15.37■□□□□ 0.05
COPA-205ENST00000541366 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
COPA-205ENST00000541366 MYD88Q99836 296 aa15.37■□□□□ 0.05
COPA-205ENST00000541366 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms