RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 AK7Q96M32 723 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 SPEF2Q9C093 1822 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 C4AP0C0L4 1744 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 CNNM1Q9NRU3 951 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 ZNF609O15014 1411 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
CLPTM1-202ENST00000541297 ERFEQ4G0M1 354 aa18.42■□□□□ 0.54
CLPTM1-202ENST00000541297 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
CLPTM1-202ENST00000541297 LAMB2P55268 1798 aa18.42■□□□□ 0.54
CLPTM1-202ENST00000541297 SEC31BQ9NQW1 1179 aa18.42■□□□□ 0.54
CLPTM1-202ENST00000541297 DIAPH3Q9NSV4 1193 aa18.42■□□□□ 0.54
CLPTM1-202ENST00000541297 ATP5JP18859 108 aa18.41■□□□□ 0.54
CLPTM1-202ENST00000541297 GLIPR1L2Q4G1C9 344 aa18.41■□□□□ 0.54
CLPTM1-202ENST00000541297 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
CLPTM1-202ENST00000541297 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
CLPTM1-202ENST00000541297 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
CLPTM1-202ENST00000541297 RIPOR2Q9Y4F9 1068 aa18.41■□□□□ 0.54
CLPTM1-202ENST00000541297 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 TAF1P21675 1872 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 RRP9O43818 475 aaKnown RBP18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 RFC4P35249 363 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 SSFA2P28290 1259 aa18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 GTF2E1P29083 439 aaPredicted RBP18.4■□□□□ 0.54
CLPTM1-202ENST00000541297 RXRBP28702 533 aa18.39■□□□□ 0.53
CLPTM1-202ENST00000541297 ADORA1P30542 326 aa18.39■□□□□ 0.53
CLPTM1-202ENST00000541297 CCDC24Q8N4L8 307 aa18.39■□□□□ 0.53
CLPTM1-202ENST00000541297 SETDB2Q96T68 719 aa18.39■□□□□ 0.53
CLPTM1-202ENST00000541297 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.53
CLPTM1-202ENST00000541297 SGSM2O43147 1006 aa18.39■□□□□ 0.53
CLPTM1-202ENST00000541297 PTMSP20962 102 aa18.38■□□□□ 0.53
CLPTM1-202ENST00000541297 CCDC152Q4G0S7 254 aa18.38■□□□□ 0.53
CLPTM1-202ENST00000541297 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
CLPTM1-202ENST00000541297 HELBQ8NG08 1087 aaPredicted RBP18.38■□□□□ 0.53
CLPTM1-202ENST00000541297 AKAP2Q9Y2D5 859 aa18.38■□□□□ 0.53
CLPTM1-202ENST00000541297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 ZMYND15Q9H091 742 aa18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 COL4A1P02462 1669 aa18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
CLPTM1-202ENST00000541297 MPHOSPH8Q99549 860 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 HAUS7Q99871 368 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 ABCC12Q96J65 1359 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 CHGBP05060 677 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 NMIQ13287 307 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 PROM2Q8N271 834 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 COL24A1Q17RW2 1714 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 TXNRD1Q16881 649 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 PALD1Q9ULE6 856 aa18.36■□□□□ 0.53
CLPTM1-202ENST00000541297 GOLIM4O00461 696 aa18.35■□□□□ 0.53
CLPTM1-202ENST00000541297 IFIT1P09914 478 aaKnown RBP18.35■□□□□ 0.53
CLPTM1-202ENST00000541297 VGLL2Q8N8G2 317 aa18.35■□□□□ 0.53
CLPTM1-202ENST00000541297 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
CLPTM1-202ENST00000541297 RGS17Q9UGC6 210 aaPredicted RBP18.35■□□□□ 0.53
CLPTM1-202ENST00000541297 LRP5O75197 1615 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 NPHP1O15259 732 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 TAF5LO75529 589 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 PDE8BO95263 885 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 TTC39AQ5SRH9 613 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 SNAP23O00161 211 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 APBA3O96018 575 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
CLPTM1-202ENST00000541297 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.53
CLPTM1-202ENST00000541297 CCDC173Q0VFZ6 552 aa18.33■□□□□ 0.53
CLPTM1-202ENST00000541297 NYXQ9GZU5 481 aa18.33■□□□□ 0.53
CLPTM1-202ENST00000541297 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.53
CLPTM1-202ENST00000541297 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.53
CLPTM1-202ENST00000541297 RGL2O15211 777 aa18.33■□□□□ 0.52
CLPTM1-202ENST00000541297 BAG4O95429 457 aaKnown RBP18.33■□□□□ 0.52
CLPTM1-202ENST00000541297 MCCP23508 829 aa18.33■□□□□ 0.52
CLPTM1-202ENST00000541297 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
CLPTM1-202ENST00000541297 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLPTM1-202ENST00000541297 HIP1O00291 1037 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 RABEP1Q15276 862 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 POTEAQ6S8J7 498 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 RAD50Q92878 1312 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 PTH1RQ03431 593 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 SCARF1Q14162 830 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 KLHL40Q2TBA0 621 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 TPTE2Q6XPS3 522 aa18.32■□□□□ 0.52
CLPTM1-202ENST00000541297 NFIXQ14938 502 aa18.31■□□□□ 0.52
CLPTM1-202ENST00000541297 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
CLPTM1-202ENST00000541297 CLEC17AQ6ZS10 378 aa18.31■□□□□ 0.52
CLPTM1-202ENST00000541297 RTL9Q8NET4 1388 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms