RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ELOA3BQ3SY89 546 aa8.77□□□□□ -1.01
MRE11-209ENST00000540013 XP32Q5T750 250 aa8.77□□□□□ -1.01
MRE11-209ENST00000540013 TTC39BQ5VTQ0 682 aaPredicted RBP8.77□□□□□ -1.01
MRE11-209ENST00000540013 KRT25Q7Z3Z0 450 aa8.77□□□□□ -1.01
MRE11-209ENST00000540013 GJD3Q8N144 294 aa8.77□□□□□ -1.01
MRE11-209ENST00000540013 ELOA3Q8NG57 546 aa8.77□□□□□ -1.01
MRE11-209ENST00000540013 EDARADDQ8WWZ3 215 aa8.77□□□□□ -1.01
MRE11-209ENST00000540013 MRRFQ96E11 262 aaKnown RBP8.77□□□□□ -1.01
MRE11-209ENST00000540013 UBE2OQ9C0C9 1292 aaKnown RBP8.77□□□□□ -1.01
MRE11-209ENST00000540013 ABI2Q9NYB9 513 aaPredicted RBP8.77□□□□□ -1.01
MRE11-209ENST00000540013 TARSP26639 723 aaKnown RBP8.76□□□□□ -1.01
MRE11-209ENST00000540013 PLAURQ03405 335 aa8.76□□□□□ -1.01
MRE11-209ENST00000540013 ZNF385CQ66K41 422 aaPredicted RBP8.76□□□□□ -1.01
MRE11-209ENST00000540013 DHX32Q7L7V1 743 aaKnown RBP8.76□□□□□ -1.01
MRE11-209ENST00000540013 GALNT6Q8NCL4 622 aa8.76□□□□□ -1.01
MRE11-209ENST00000540013 PMEPA1Q969W9 287 aa8.76□□□□□ -1.01
MRE11-209ENST00000540013 DRC1Q96MC2 740 aa8.76□□□□□ -1.01
MRE11-209ENST00000540013 CCDC87Q9NVE4 849 aa8.76□□□□□ -1.01
MRE11-209ENST00000540013 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
MRE11-209ENST00000540013 NRLP54845 237 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 KANK3Q6NY19 840 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 FCHSD1Q86WN1 690 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 DMRTB1Q96MA1 342 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 RBCK1Q9BYM8 510 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 ELP3Q9H9T3 547 aa8.75□□□□□ -1.01
MRE11-209ENST00000540013 HOXD8P13378 290 aaPredicted RBP8.74□□□□□ -1.01
MRE11-209ENST00000540013 ADH7P40394 386 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 GPLD1P80108 840 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 ZSCAN29Q8IWY8 852 aaPredicted RBP8.74□□□□□ -1.01
MRE11-209ENST00000540013 TMEM151AQ8N4L1 468 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 NEDD1Q8NHV4 660 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 ZFATQ9P243 1243 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 KLF15Q9UIH9 416 aa8.74□□□□□ -1.01
MRE11-209ENST00000540013 PHF20L1A8MW92 1017 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 PIK3R2O00459 728 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 MMP20O60882 483 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 AMPD1P23109 780 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 MAPK1P28482 360 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 TBC1D8BQ0IIM8 1120 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 OR13H1Q8NG92 308 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 SNX29Q8TEQ0 813 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 SREK1Q8WXA9 508 aaKnown RBP8.73□□□□□ -1.01
MRE11-209ENST00000540013 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 GGNBP2Q9H3C7 697 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 IGFLR1Q9H665 355 aa8.73□□□□□ -1.01
MRE11-209ENST00000540013 DNAJB12Q9NXW2 375 aaKnown RBP8.73□□□□□ -1.01
MRE11-209ENST00000540013 CFTRP13569 1480 aa8.72□□□□□ -1.01
MRE11-209ENST00000540013 MRC2Q9UBG0 1479 aa8.72□□□□□ -1.01
MRE11-209ENST00000540013 PRDM2Q13029 1718 aa8.72□□□□□ -1.01
MRE11-209ENST00000540013 WHAMMQ8TF30 809 aa8.72□□□□□ -1.01
MRE11-209ENST00000540013 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
MRE11-209ENST00000540013 MDFIQ99750 246 aa8.72□□□□□ -1.01
MRE11-209ENST00000540013 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.01
MRE11-209ENST00000540013 CEP164Q9UPV0 1460 aa8.71□□□□□ -1.01
MRE11-209ENST00000540013 GDF11O95390 407 aa8.71□□□□□ -1.02
MRE11-209ENST00000540013 TCF3P15923 654 aa8.71□□□□□ -1.02
MRE11-209ENST00000540013 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
MRE11-209ENST00000540013 DHX37Q8IY37 1157 aaKnown RBP8.71□□□□□ -1.02
MRE11-209ENST00000540013 SLC6A14Q9UN76 642 aa8.71□□□□□ -1.02
MRE11-209ENST00000540013 WDR62O43379 1518 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 SMARCA5O60264 1052 aaPredicted RBP8.7□□□□□ -1.02
MRE11-209ENST00000540013 PHACTR2O75167 634 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 ARHGEF15O94989 841 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 NCLP19338 710 aaKnown RBP8.7□□□□□ -1.02
MRE11-209ENST00000540013 HYAL2Q12891 473 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
MRE11-209ENST00000540013 CHSY3Q70JA7 882 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
MRE11-209ENST00000540013 BTBD6Q96KE9 485 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 SPACA7Q96KW9 195 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
MRE11-209ENST00000540013 TNFRSF21O75509 655 aa8.69□□□□□ -1.02
MRE11-209ENST00000540013 GHRHP01286 108 aa8.69□□□□□ -1.02
MRE11-209ENST00000540013 CES1P23141 567 aa8.69□□□□□ -1.02
MRE11-209ENST00000540013 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
MRE11-209ENST00000540013 PODNQ7Z5L7 613 aa8.69□□□□□ -1.02
MRE11-209ENST00000540013 FAM35AQ86V20 835 aa8.69□□□□□ -1.02
MRE11-209ENST00000540013 FRRS1LQ9P0K9 344 aa8.69□□□□□ -1.02
MRE11-209ENST00000540013 SHISA8B8ZZ34 492 aa8.68□□□□□ -1.02
MRE11-209ENST00000540013 ZNF16P17020 682 aaPredicted RBP8.68□□□□□ -1.02
MRE11-209ENST00000540013 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
MRE11-209ENST00000540013 CWC22Q9HCG8 908 aaKnown RBP8.68□□□□□ -1.02
MRE11-209ENST00000540013 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 CCDC88BA6NC98 1476 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 A6NHS1 94 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 SIK1P57059 783 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 RASSF7Q02833 373 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 DNAJC25Q9H1X3 360 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
MRE11-209ENST00000540013 KIF4AO95239 1232 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 EIF2AK2P19525 551 aaKnown RBP8.66□□□□□ -1.02
MRE11-209ENST00000540013 ELMSAN1Q6PJG2 1045 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 TMC7Q7Z402 723 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 NCAPG2Q86XI2 1143 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms