RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 C1orf115Q9H7X2 142 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 GRPEL1Q9HAV7 217 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 ABCC4O15439 1325 aa15□□□□□ -0.01
DDX55-206ENST00000539934 BRD1O95696 1058 aa15□□□□□ -0.01
DDX55-206ENST00000539934 TRDNQ13061 729 aa15□□□□□ -0.01
DDX55-206ENST00000539934 FEZ1Q99689 392 aa15□□□□□ -0.01
DDX55-206ENST00000539934 SUFUQ9UMX1 484 aa15□□□□□ -0.01
DDX55-206ENST00000539934 BIRC2Q13490 618 aa15□□□□□ -0.01
DDX55-206ENST00000539934 ZBTB40Q9NUA8 1239 aa15□□□□□ -0.01
DDX55-206ENST00000539934 AKAP4Q5JQC9 854 aa14.99□□□□□ -0.01
DDX55-206ENST00000539934 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
DDX55-206ENST00000539934 MTA3Q9BTC8 594 aa14.99□□□□□ -0.01
DDX55-206ENST00000539934 BABAM1Q9NWV8 329 aa14.99□□□□□ -0.01
DDX55-206ENST00000539934 TMOD3Q9NYL9 352 aa14.99□□□□□ -0.01
DDX55-206ENST00000539934 PAX7P23759 505 aa14.98□□□□□ -0.01
DDX55-206ENST00000539934 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
DDX55-206ENST00000539934 NUCKS1Q9H1E3 243 aaKnown RBP14.98□□□□□ -0.01
DDX55-206ENST00000539934 SUDS3Q9H7L9 328 aaPredicted RBP14.98□□□□□ -0.01
DDX55-206ENST00000539934 CICQ96RK0 1608 aaPredicted RBP14.98□□□□□ -0.01
DDX55-206ENST00000539934 CCT2P78371 535 aaKnown RBP14.98□□□□□ -0.01
DDX55-206ENST00000539934 C16orf71Q8IYS4 520 aaPredicted RBP14.98□□□□□ -0.01
DDX55-206ENST00000539934 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
DDX55-206ENST00000539934 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 CD151P48509 253 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 KLRG1Q96E93 195 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
DDX55-206ENST00000539934 RSPH14Q9UHP6 348 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 PTPRCP08575 1304 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 CCDC173Q0VFZ6 552 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 TEFQ10587 303 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 DNAJC21Q5F1R6 531 aaKnown RBP14.97□□□□□ -0.01
DDX55-206ENST00000539934 PPP1R9BQ96SB3 815 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
DDX55-206ENST00000539934 RRAGCQ9HB90 399 aa14.97□□□□□ -0.01
DDX55-206ENST00000539934 ZBTB7BO15156 539 aaPredicted RBP14.96□□□□□ -0.01
DDX55-206ENST00000539934 TNS4Q8IZW8 715 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 CXorf56Q9H5V9 222 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 ATG3Q9NT62 314 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 CACNA1FO60840 1977 aa14.96□□□□□ -0.01
DDX55-206ENST00000539934 KCPQ6ZWJ8 1503 aa14.96□□□□□ -0.02
DDX55-206ENST00000539934 GTF2F1P35269 517 aaKnown RBP eCLIP14.96□□□□□ -0.02
DDX55-206ENST00000539934 TRAPPC3LQ5T215 181 aa14.96□□□□□ -0.02
DDX55-206ENST00000539934 WDR90Q96KV7 1748 aa14.96□□□□□ -0.02
DDX55-206ENST00000539934 ANKRD33BA6NCL7 494 aa14.95□□□□□ -0.02
DDX55-206ENST00000539934 SLFN14P0C7P3 912 aa14.95□□□□□ -0.02
DDX55-206ENST00000539934 BECN1Q14457 450 aa14.95□□□□□ -0.02
DDX55-206ENST00000539934 PIK3R5Q8WYR1 880 aa14.95□□□□□ -0.02
DDX55-206ENST00000539934 PDZRN3Q9UPQ7 1066 aa14.95□□□□□ -0.02
DDX55-206ENST00000539934 RTCBQ9Y3I0 505 aaKnown RBP14.95□□□□□ -0.02
DDX55-206ENST00000539934 KDM3BQ7LBC6 1761 aa14.95□□□□□ -0.02
DDX55-206ENST00000539934 TPM3P06753 285 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
DDX55-206ENST00000539934 ATL2Q8NHH9 583 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 SOS1Q07889 1333 aaPredicted RBP14.94□□□□□ -0.02
DDX55-206ENST00000539934 KCNA3P22001 575 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 TGFB2P61812 414 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 MYRIPQ8NFW9 859 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 RNF181Q9P0P0 153 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 KIAA1551Q9HCM1 1747 aa14.94□□□□□ -0.02
DDX55-206ENST00000539934 GYS1P13807 737 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 ERCC3P19447 782 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 CHRNA5P30532 468 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 GSCP56915 257 aaPredicted RBP14.93□□□□□ -0.02
DDX55-206ENST00000539934 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 SPG7Q9UQ90 795 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 RNMTO43148 476 aaKnown RBP14.93□□□□□ -0.02
DDX55-206ENST00000539934 HDGFL1Q5TGJ6 251 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 ZNF280DQ6N043 979 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 ERCC4Q92889 916 aaPredicted RBP14.93□□□□□ -0.02
DDX55-206ENST00000539934 RASSF4Q9H2L5 321 aa14.93□□□□□ -0.02
DDX55-206ENST00000539934 SRP68Q9UHB9 627 aaKnown RBP14.93□□□□□ -0.02
DDX55-206ENST00000539934 CCDC196A0A1B0GTZ2 297 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 RFC4P35249 363 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
DDX55-206ENST00000539934 INTS3Q68E01 1043 aaKnown RBP14.92□□□□□ -0.02
DDX55-206ENST00000539934 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 RBM46Q8TBY0 533 aaKnown RBP14.92□□□□□ -0.02
DDX55-206ENST00000539934 CEP126Q9P2H0 1117 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 PHKG2P15735 406 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 NLGN1Q8N2Q7 840 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 CCDC87Q9NVE4 849 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 OGFRQ9NZT2 677 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 PARP3Q9Y6F1 533 aa14.92□□□□□ -0.02
DDX55-206ENST00000539934 G2E3Q7L622 706 aa14.91□□□□□ -0.02
DDX55-206ENST00000539934 CCDC91Q7Z6B0 441 aa14.91□□□□□ -0.02
DDX55-206ENST00000539934 TBC1D22AQ8WUA7 517 aa14.91□□□□□ -0.02
DDX55-206ENST00000539934 DDX49Q9Y6V7 483 aaKnown RBP14.91□□□□□ -0.02
DDX55-206ENST00000539934 C10orf71Q711Q0 1435 aa14.91□□□□□ -0.02
DDX55-206ENST00000539934 PTCD1O75127 700 aaKnown RBP14.9□□□□□ -0.02
DDX55-206ENST00000539934 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
DDX55-206ENST00000539934 MCM5P33992 734 aa14.9□□□□□ -0.02
DDX55-206ENST00000539934 SMC5Q8IY18 1101 aa14.9□□□□□ -0.02
DDX55-206ENST00000539934 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
DDX55-206ENST00000539934 KIF13BQ9NQT8 1826 aa14.9□□□□□ -0.02
DDX55-206ENST00000539934 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms