RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 IQSEC3Q9UPP2 1182 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-208ENST00000538266 TRAK1Q9UPV9 953 aa6.03□□□□□ -1.44
SNHG1-208ENST00000538266 USP3Q9Y6I4 520 aa6.03□□□□□ -1.44
SNHG1-208ENST00000538266 ABCC11Q96J66 1382 aa6.03□□□□□ -1.44
SNHG1-208ENST00000538266 STRCP1A6NGW2 1772 aa6.03□□□□□ -1.44
SNHG1-208ENST00000538266 FAM135BQ49AJ0 1406 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 NOS2P35228 1153 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 FOXK2Q01167 660 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 GAS2L2Q8NHY3 880 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 PRIMPOLQ96LW4 560 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 PRAM1Q96QH2 718 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 TIMMDC1Q9NPL8 285 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 PARP3Q9Y6F1 533 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 LRRC7Q96NW7 1537 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 DLC1Q96QB1 1528 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 MSH6P52701 1360 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 TMEM94Q12767 1356 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 GPRASP1Q5JY77 1395 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 LTBP4Q8N2S1 1624 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 ROBO2Q9HCK4 1378 aa6.02□□□□□ -1.45
SNHG1-208ENST00000538266 ARHGEF28Q8N1W1 1705 aaKnown RBP6.02□□□□□ -1.45
SNHG1-208ENST00000538266 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
SNHG1-208ENST00000538266 PPP1R12BO60237 982 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-208ENST00000538266 SAFB2Q14151 953 aaKnown RBP eCLIP6.01□□□□□ -1.45
SNHG1-208ENST00000538266 SWI5Q1ZZU3 235 aa6.01□□□□□ -1.45
SNHG1-208ENST00000538266 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-208ENST00000538266 ZNF232Q9UNY5 417 aa6.01□□□□□ -1.45
SNHG1-208ENST00000538266 CHMP3Q9Y3E7 222 aa6.01□□□□□ -1.45
SNHG1-208ENST00000538266 USP47Q96K76 1375 aa6.01□□□□□ -1.45
SNHG1-208ENST00000538266 CENPJQ9HC77 1338 aaPredicted RBP6□□□□□ -1.45
SNHG1-208ENST00000538266 ADGRL3Q9HAR2 1447 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 NCOA3Q9Y6Q9 1424 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 SERTM1A2A2V5 107 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 SLC35F4A4IF30 521 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 C21orf2O43822 256 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 PRMT3O60678 531 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 ATF3P18847 181 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 PLA2G4AP47712 749 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 PSMA6P60900 246 aaKnown RBP6□□□□□ -1.45
SNHG1-208ENST00000538266 PDE4CQ08493 712 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 TEAD4Q15561 434 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 WAPLQ7Z5K2 1190 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 CCDC155Q8N6L0 562 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 HCN4Q9Y3Q4 1203 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 DYRK1BQ9Y463 629 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 IQSEC2Q5JU85 1478 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 QRICH2Q9H0J4 1663 aa6□□□□□ -1.45
SNHG1-208ENST00000538266 DCCP43146 1447 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 NALCNQ8IZF0 1738 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 CDC42BPGQ6DT37 1551 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 PLEKHH1Q9ULM0 1364 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 SENP3-EIF4A1A0A087X0R7 540 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 TMEM88BA6NKF7 163 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 IGFBP4P22692 258 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 WEE1P30291 646 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 ZNF295-AS1Q8N0V1 137 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 RETREG2Q8NC44 543 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 ZDHHC1Q8WTX9 485 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 CLP1Q92989 425 aaKnown RBP5.99□□□□□ -1.45
SNHG1-208ENST00000538266 C19orf44Q9H6X5 657 aa5.99□□□□□ -1.45
SNHG1-208ENST00000538266 NXF1Q9UBU9 619 aaKnown RBP5.99□□□□□ -1.45
SNHG1-208ENST00000538266 XIRP1Q702N8 1843 aaKnown RBP5.99□□□□□ -1.45
SNHG1-208ENST00000538266 ADGRB2O60241 1585 aa5.98□□□□□ -1.45
SNHG1-208ENST00000538266 A0A1B0GTH6 734 aa5.98□□□□□ -1.45
SNHG1-208ENST00000538266 PPFIA3O75145 1194 aa5.98□□□□□ -1.45
SNHG1-208ENST00000538266 F11P03951 625 aa5.98□□□□□ -1.45
SNHG1-208ENST00000538266 MSX1P28360 303 aa5.98□□□□□ -1.45
SNHG1-208ENST00000538266 RIPOR1Q6ZS17 1223 aa5.98□□□□□ -1.45
SNHG1-208ENST00000538266 C2orf49Q9BVC5 232 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-208ENST00000538266 HIRIP3Q9BW71 556 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-208ENST00000538266 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-208ENST00000538266 SBNO2Q9Y2G9 1366 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 ST20-MTHFSA0A0A6YYL1 179 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 EML1O00423 815 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 TOM1O60784 492 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 VEGFBP49765 207 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 STAG2Q8N3U4 1231 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 VTI1AQ96AJ9 217 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 GPAMQ9HCL2 828 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.97□□□□□ -1.451e-323■■■■□ 19.6
SNHG1-208ENST00000538266 SLAIN2Q9P270 581 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 USTQ9Y2C2 406 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 EVC2Q86UK5 1308 aa5.97□□□□□ -1.45
SNHG1-208ENST00000538266 UBAP1LF5GYI3 381 aa5.96□□□□□ -1.46
SNHG1-208ENST00000538266 TATP17735 454 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-208ENST00000538266 ATP2B4P23634 1241 aa5.96□□□□□ -1.46
SNHG1-208ENST00000538266 TXLNAP40222 546 aa5.96□□□□□ -1.46
SNHG1-208ENST00000538266 OCLNQ16625 522 aa5.96□□□□□ -1.46
SNHG1-208ENST00000538266 ARSJQ5FYB0 599 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-208ENST00000538266 SH3PXD2AQ5TCZ1 1133 aa5.96□□□□□ -1.46
SNHG1-208ENST00000538266 FMN2Q9NZ56 1722 aa5.96□□□□□ -1.46
SNHG1-208ENST00000538266 TULP4Q9NRJ4 1543 aa5.95□□□□□ -1.46
SNHG1-208ENST00000538266 H7C1W4 665 aa5.95□□□□□ -1.46
SNHG1-208ENST00000538266 TERTO14746 1132 aaKnown RBP5.95□□□□□ -1.46
SNHG1-208ENST00000538266 FOXO3O43524 673 aa5.95□□□□□ -1.46
SNHG1-208ENST00000538266 HSPA5P11021 654 aaKnown RBP5.95□□□□□ -1.46
SNHG1-208ENST00000538266 ITGA6P23229 1130 aa5.95□□□□□ -1.46
SNHG1-208ENST00000538266 SSFA2P28290 1259 aa5.95□□□□□ -1.46
SNHG1-208ENST00000538266 PIP4K2BP78356 416 aa5.95□□□□□ -1.46
SNHG1-208ENST00000538266 TMF1P82094 1093 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms