RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 FRMPD1Q5SYB0 1578 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 SYCP1Q15431 976 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 BRF1Q92994 677 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 FAM76AQ8TAV0 307 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 NEXMIFQ5QGS0 1516 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 OPA1O60313 960 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 MAATS1Q7Z4T9 603 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
NCAPD3-214ENST00000534548 SYKP43405 635 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 EIF4A2Q14240 407 aaKnown RBP11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 RBM8AQ9Y5S9 174 aaKnown RBP11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 TANGO6Q9C0B7 1094 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 ZNF569Q5MCW4 686 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 GOLGA5Q8TBA6 731 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 PDLIM2Q96JY6 352 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 LRRC7Q96NW7 1537 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 ABCC4O15439 1325 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 USO1O60763 962 aaKnown RBP11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 TUBBP07437 444 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 CPA1P15085 419 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 CTCFLQ8NI51 663 aaPredicted RBP11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
NCAPD3-214ENST00000534548 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 INPP5BP32019 993 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 HNRNPH2P55795 449 aaKnown RBP11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 FLIIQ13045 1269 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 RHPN1Q8TCX5 695 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 RAD50Q92878 1312 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 DNA2P51530 1060 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 IFFO1Q0D2I5 559 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 PNPLA6Q8IY17 1366 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 TTC39AQ5SRH9 613 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 CCDC121Q6ZUS5 278 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 FAM135BQ49AJ0 1406 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 PTPRMP28827 1452 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 ZEB2O60315 1214 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 ZSCAN20P17040 1043 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 CCDC158Q5M9N0 1113 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 G2E3Q7L622 706 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 KCNG4Q8TDN1 519 aa11.73□□□□□ -0.53
NCAPD3-214ENST00000534548 COL3A1P02461 1466 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 HLTFQ14527 1009 aaKnown RBP eCLIP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 NAA25Q14CX7 972 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 CCDC114Q96M63 670 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 ZC3H13Q5T200 1668 aaKnown RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 CD163L1Q9NR16 1453 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 ZBTB22O15209 634 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 SARNPP82979 210 aaKnown RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 WASF1Q92558 559 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 CCDC113Q9H0I3 377 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 IMPACTQ9P2X3 320 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 A0A1B0GUA9 196 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 FKBP4Q02790 459 aaKnown RBP eCLIP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 NCBP1Q09161 790 aaKnown RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 NUP133Q8WUM0 1156 aa11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 ARHGEF28Q8N1W1 1705 aaKnown RBP11.72□□□□□ -0.53
NCAPD3-214ENST00000534548 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 MSL1Q68DK7 614 aa11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 LRRC8AQ8IWT6 810 aa11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
NCAPD3-214ENST00000534548 ADGRB2O60241 1585 aa11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 ELP1O95163 1332 aa11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 GOLGA6L10A0A0M3HER8 536 aa11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 RUFY3Q7L099 469 aa11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 GPR161Q8N6U8 529 aaKnown RBP11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 LRRC2Q9BYS8 371 aa11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.54
NCAPD3-214ENST00000534548 GOLGA8BA8MQT2 603 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms