RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 GOLGA1Q92805 767 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 CCDC102BQ68D86 513 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 ZSCAN29Q8IWY8 852 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 AKAP2Q9Y2D5 859 aa13.87□□□□□ -0.19
AMBRA1-212ENST00000534300 GABPB1Q06547 395 aaPredicted RBP13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 IFIT5Q13325 482 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 WWC2Q6AWC2 1192 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 HOOK3Q86VS8 718 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 PAF1Q8N7H5 531 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 SSR1P43307 286 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 UBASH3AP57075 661 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 TPTE2Q6XPS3 522 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 NSRP1Q9H0G5 558 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 A0A1B0GUL7 405 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 LIG1P18858 919 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 DNA2P51530 1060 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 IGSF3O75054 1194 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
AMBRA1-212ENST00000534300 GBP6Q6ZN66 633 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 CEP57Q86XR8 500 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 ANKRD18BA2A2Z9 1011 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 IGHDP01880 384 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 ARFGAP2Q8N6H7 521 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 MYD88Q99836 296 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 PYM1Q9BRP8 204 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 FSD2A1L4K1 749 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 ANO6Q4KMQ2 910 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 METTL24Q5JXM2 366 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 DDX17Q92841 729 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 DISP3Q9P2K9 1392 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 TRIM27P14373 513 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 CCDC6Q16204 474 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 CCDC121Q6ZUS5 278 aa13.85□□□□□ -0.19
AMBRA1-212ENST00000534300 GOLIM4O00461 696 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 MTIF2P46199 727 aaKnown RBP13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 SMC5Q8IY18 1101 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 ZFYVE9O95405 1425 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 A0A1B0GUA9 196 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 HDAC1Q13547 482 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 TMCO5BA8MYB1 307 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 GNPATO15228 680 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 ATP2C2O75185 946 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 GPTP24298 496 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 JDP2Q8WYK2 163 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 MIS18AQ9NYP9 233 aa13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.84□□□□□ -0.19
AMBRA1-212ENST00000534300 MAP3K19Q56UN5 1328 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 ANAPC15P60006 121 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 ANKS4BQ8N8V4 417 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 SBNO1A3KN83 1393 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 N4BP3O15049 544 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 FAM114A1Q8IWE2 563 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 RAB34Q9BZG1 259 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 ADGBQ8N7X0 1667 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 CYLC1P35663 651 aaPredicted RBP13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 MATR3P43243 847 aaKnown RBP eCLIP13.83□□□□□ -0.29e-7■■■■□ 20.5
AMBRA1-212ENST00000534300 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 SPAG1Q07617 926 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 TTC22Q5TAA0 569 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 ERO1AQ96HE7 468 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 CTAGE1Q96RT6 745 aa13.83□□□□□ -0.2
AMBRA1-212ENST00000534300 AKR1B10O60218 316 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 BOLA2Q9H3K6 86 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 VPS18Q9P253 973 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.29e-6■□□□□ 11.3
AMBRA1-212ENST00000534300 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 GLI2P10070 1586 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 RSRC1Q96IZ7 334 aaKnown RBP13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 MYO1BO43795 1136 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 DDX12PQ92771 950 aa13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.82□□□□□ -0.2
AMBRA1-212ENST00000534300 ABCC3O15438 1527 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 CFAP65Q6ZU64 1925 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 CTAGE9A4FU28 777 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 CCDC114Q96M63 670 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 HMG20BQ9P0W2 317 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms