RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ANXA1P04083 346 aa16.27■□□□□ 0.2
CAPN1-223ENST00000533079 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
CAPN1-223ENST00000533079 AIMP1Q12904 312 aaKnown RBP16.27■□□□□ 0.2
CAPN1-223ENST00000533079 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
CAPN1-223ENST00000533079 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
CAPN1-223ENST00000533079 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
CAPN1-223ENST00000533079 HPS5Q9UPZ3 1129 aa16.27■□□□□ 0.2
CAPN1-223ENST00000533079 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
CAPN1-223ENST00000533079 ZNF280AP59817 542 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-223ENST00000533079 GPSM2P81274 684 aa16.26■□□□□ 0.19
CAPN1-223ENST00000533079 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
CAPN1-223ENST00000533079 RBM26Q5T8P6 1007 aaKnown RBP16.26■□□□□ 0.19
CAPN1-223ENST00000533079 AGBL3Q8NEM8 1001 aa16.26■□□□□ 0.19
CAPN1-223ENST00000533079 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
CAPN1-223ENST00000533079 TBC1D16Q8TBP0 767 aa16.26■□□□□ 0.19
CAPN1-223ENST00000533079 COL4A1P02462 1669 aa16.26■□□□□ 0.19
CAPN1-223ENST00000533079 HSP90B1P14625 803 aaKnown RBP16.25■□□□□ 0.19
CAPN1-223ENST00000533079 GCC1Q96CN9 775 aa16.25■□□□□ 0.19
CAPN1-223ENST00000533079 ZC3H12CQ9C0D7 883 aaKnown RBP16.25■□□□□ 0.19
CAPN1-223ENST00000533079 SCN9AQ15858 1988 aa16.24■□□□□ 0.19
CAPN1-223ENST00000533079 HOXB7P09629 217 aa16.24■□□□□ 0.19
CAPN1-223ENST00000533079 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
CAPN1-223ENST00000533079 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
CAPN1-223ENST00000533079 HDAC9Q9UKV0 1011 aa16.24■□□□□ 0.19
CAPN1-223ENST00000533079 G3V3G9 751 aa16.23■□□□□ 0.19
CAPN1-223ENST00000533079 RIPK4P57078 832 aa16.23■□□□□ 0.19
CAPN1-223ENST00000533079 DCAF8Q5TAQ9 597 aa16.23■□□□□ 0.19
CAPN1-223ENST00000533079 ANGEL2Q5VTE6 544 aaKnown RBP16.23■□□□□ 0.19
CAPN1-223ENST00000533079 RSBN1LQ6PCB5 846 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-223ENST00000533079 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
CAPN1-223ENST00000533079 KCNQ5Q9NR82 932 aa16.23■□□□□ 0.19
CAPN1-223ENST00000533079 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
CAPN1-223ENST00000533079 RPS8P62241 208 aaKnown RBP16.22■□□□□ 0.19
CAPN1-223ENST00000533079 TRIM28Q13263 835 aaKnown RBP16.22■□□□□ 0.19
CAPN1-223ENST00000533079 ZNF296Q8WUU4 475 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-223ENST00000533079 CHPF2Q9P2E5 772 aa16.22■□□□□ 0.19
CAPN1-223ENST00000533079 UFL1O94874 794 aa16.21■□□□□ 0.19
CAPN1-223ENST00000533079 SCARF1Q14162 830 aa16.21■□□□□ 0.19
CAPN1-223ENST00000533079 ANKRD13DQ6ZTN6 518 aa16.21■□□□□ 0.19
CAPN1-223ENST00000533079 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
CAPN1-223ENST00000533079 MYOZ2Q9NPC6 264 aa16.21■□□□□ 0.19
CAPN1-223ENST00000533079 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-223ENST00000533079 GGA1Q9UJY5 639 aa16.21■□□□□ 0.19
CAPN1-223ENST00000533079 ASTN2O75129 1339 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-223ENST00000533079 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-223ENST00000533079 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
CAPN1-223ENST00000533079 FBXO46Q6PJ61 603 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-223ENST00000533079 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
CAPN1-223ENST00000533079 USP17L8P0C7I0 530 aa16.19■□□□□ 0.18
CAPN1-223ENST00000533079 TM4SF4P48230 202 aa16.19■□□□□ 0.18
CAPN1-223ENST00000533079 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
CAPN1-223ENST00000533079 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
CAPN1-223ENST00000533079 XDHP47989 1333 aa16.19■□□□□ 0.18
CAPN1-223ENST00000533079 CHL1O00533 1208 aa16.18■□□□□ 0.18
CAPN1-223ENST00000533079 NF2P35240 595 aa16.18■□□□□ 0.18
CAPN1-223ENST00000533079 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
CAPN1-223ENST00000533079 PODNQ7Z5L7 613 aa16.18■□□□□ 0.18
CAPN1-223ENST00000533079 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-223ENST00000533079 GMLQ99445 158 aa16.18■□□□□ 0.18
CAPN1-223ENST00000533079 LAMB1P07942 1786 aa16.18■□□□□ 0.18
CAPN1-223ENST00000533079 USP17L3A6NCW0 530 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 USP17L4A6NCW7 530 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 GPR25O00155 361 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 MMP14P50281 582 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 CCDC152Q4G0S7 254 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 USP17L1Q7RTZ2 530 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 ZNF646O15015 1829 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-223ENST00000533079 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
CAPN1-223ENST00000533079 COL1A1P02452 1464 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-223ENST00000533079 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
CAPN1-223ENST00000533079 RBBP6Q7Z6E9 1792 aaKnown RBP16.16■□□□□ 0.18
CAPN1-223ENST00000533079 HTTP42858 3142 aa16.16■□□□□ 0.18
CAPN1-223ENST00000533079 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
CAPN1-223ENST00000533079 FKTNO75072 461 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 ALDH1A1P00352 501 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-223ENST00000533079 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
CAPN1-223ENST00000533079 UBE2Q2LH0YL09 131 aa16.13■□□□□ 0.17
CAPN1-223ENST00000533079 PDE8AO60658 829 aa16.13■□□□□ 0.17
CAPN1-223ENST00000533079 PCCAP05165 728 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-223ENST00000533079 TTLL12Q14166 644 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-223ENST00000533079 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
CAPN1-223ENST00000533079 ANKRD18AQ8IVF6 992 aa16.13■□□□□ 0.17
CAPN1-223ENST00000533079 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
CAPN1-223ENST00000533079 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
CAPN1-223ENST00000533079 MOB2Q70IA6 237 aa16.12■□□□□ 0.17
CAPN1-223ENST00000533079 ARMC9Q7Z3E5 817 aa16.12■□□□□ 0.17
CAPN1-223ENST00000533079 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
CAPN1-223ENST00000533079 APOBEC3FQ8IUX4 373 aaKnown RBP16.12■□□□□ 0.17
CAPN1-223ENST00000533079 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
CAPN1-223ENST00000533079 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
CAPN1-223ENST00000533079 CDC5LQ99459 802 aaKnown RBP16.11■□□□□ 0.17
CAPN1-223ENST00000533079 WNT10BO00744 389 aa16.1■□□□□ 0.17
CAPN1-223ENST00000533079 INHBEP58166 350 aa16.1■□□□□ 0.17
CAPN1-223ENST00000533079 STRIP1Q5VSL9 837 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms