RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 TSPY2A6NKD2 308 aa9.28□□□□□ -0.92
CTNND1-234ENST00000532844 EXOC5O00471 708 aa9.28□□□□□ -0.92
CTNND1-234ENST00000532844 KANK3Q6NY19 840 aa9.28□□□□□ -0.92
CTNND1-234ENST00000532844 XAGE3Q8WTP9 111 aa9.28□□□□□ -0.92
CTNND1-234ENST00000532844 CDC5LQ99459 802 aaKnown RBP9.28□□□□□ -0.92
CTNND1-234ENST00000532844 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
CTNND1-234ENST00000532844 DYNC1I1O14576 645 aa9.27□□□□□ -0.92
CTNND1-234ENST00000532844 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.92
CTNND1-234ENST00000532844 PIK3C2GO75747 1445 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 F13A1P00488 732 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 RFC1P35251 1148 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-234ENST00000532844 PDE4BQ07343 736 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 NMIQ13287 307 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-234ENST00000532844 TCP11L1Q9NUJ3 509 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 ABCC1P33527 1531 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 FSD2A1L4K1 749 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 UQCRFS1P1P0C7P4 283 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 SYKP43405 635 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 AMPD3Q01432 767 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 CHRNA2Q15822 529 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-234ENST00000532844 VAT1LQ9HCJ6 419 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 A2MP01023 1474 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 KIF20AO95235 890 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 CAVIN2O95810 425 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 XRCC6P12956 609 aaKnown RBP eCLIP9.27□□□□□ -0.932e-8■□□□□ 8.5
CTNND1-234ENST00000532844 CEP85Q6P2H3 762 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
CTNND1-234ENST00000532844 RPUSD2Q8IZ73 545 aaKnown RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 TSPYL6Q8N831 410 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 CEP112Q8N8E3 955 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 PYM1Q9BRP8 204 aaKnown RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 NAA15Q9BXJ9 866 aaKnown RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 GOLGA6L9A6NEM1 432 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 GRM8O00222 908 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 POLKQ9UBT6 870 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 ALDH1L1O75891 902 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 DNM1Q05193 864 aaKnown RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 WTAPQ15007 396 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 CCDC40Q4G0X9 1142 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 COPS6Q7L5N1 327 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 ALG1Q9BT22 464 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 PAXBP1Q9Y5B6 917 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 RIMS2Q9UQ26 1411 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 SLC39A6Q13433 755 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 BIN2Q9UBW5 565 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 PA2G4Q9UQ80 394 aaKnown RBP9.26□□□□□ -0.93
CTNND1-234ENST00000532844 CCDC171Q6TFL3 1326 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 AKAP4Q5JQC9 854 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 KSR2Q6VAB6 950 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 PRIMPOLQ96LW4 560 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 KIAA0556O60303 1618 aa9.26□□□□□ -0.93
CTNND1-234ENST00000532844 RAB3GAP1Q15042 981 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 CEP57Q86XR8 500 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 KRT23Q9C075 422 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 ZBTB43O43298 467 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 UBASH3AP57075 661 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 EHMT1Q9H9B1 1298 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 ATP2C2O75185 946 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 VAMP4O75379 141 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 IDEP14735 1019 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 KCNG4Q8TDN1 519 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 RSRC1Q96IZ7 334 aaKnown RBP9.25□□□□□ -0.93
CTNND1-234ENST00000532844 WDR62O43379 1518 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 MRPS27Q92552 414 aaKnown RBP9.25□□□□□ -0.93
CTNND1-234ENST00000532844 TESK2Q96S53 571 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 PSMD1Q99460 953 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 NSRP1Q9H0G5 558 aaKnown RBP9.25□□□□□ -0.93
CTNND1-234ENST00000532844 DCTPP1Q9H773 170 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 RBM28Q9NW13 759 aaKnown RBP9.25□□□□□ -0.93
CTNND1-234ENST00000532844 ANAPC4Q9UJX5 808 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 SLC4A4Q9Y6R1 1079 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 ZFYVE9O95405 1425 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 GNG11P61952 73 aa9.25□□□□□ -0.93
CTNND1-234ENST00000532844 HLTFQ14527 1009 aaKnown RBP eCLIP9.25□□□□□ -0.935e-6■□□□□ 9.8
CTNND1-234ENST00000532844 CRNKL1Q9BZJ0 848 aaKnown RBP9.25□□□□□ -0.93
CTNND1-234ENST00000532844 MSH6P52701 1360 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 BAG3O95817 575 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 UBA7P41226 1012 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 AFMP43652 599 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-234ENST00000532844 CCDC152Q4G0S7 254 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 FAM200AQ8TCP9 573 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 DNAJC25Q9H1X3 360 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 ZBTB40Q9NUA8 1239 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 DACT1Q9NYF0 836 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 ARHGEF12Q9NZN5 1544 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 AK2P54819 239 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 MXRA7P84157 204 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 NOLC1Q14978 699 aaKnown RBP eCLIP9.24□□□□□ -0.93
CTNND1-234ENST00000532844 RRAGBQ5VZM2 374 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 SPTY2D1Q68D10 685 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-234ENST00000532844 MAATS1Q7Z4T9 603 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 SMC5Q8IY18 1101 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 AOPEPQ8N6M6 819 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 CEP120Q8N960 986 aa9.24□□□□□ -0.93
CTNND1-234ENST00000532844 MPHOSPH6Q99547 160 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms