RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 QRICH2Q9H0J4 1663 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 GOLGA6L19H0YKK7 550 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 CAVIN2O95810 425 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 IFIT2P09913 472 aaKnown RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 CHMLP26374 656 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 NF2P35240 595 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 SETQ01105 290 aaPredicted RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 GNL2Q13823 731 aaKnown RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 C11orf57Q6ZUT1 292 aaPredicted RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 HNRNPLLQ8WVV9 542 aaKnown RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 THOC1Q96FV9 657 aaKnown RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 DDX19AQ9NUU7 478 aaKnown RBP9.02□□□□□ -0.97
PTPRK-219ENST00000531050 NPATQ14207 1427 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 KNDC1Q76NI1 1749 aa9.02□□□□□ -0.97
PTPRK-219ENST00000531050 IL16Q14005 1332 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 HDXQ7Z353 690 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.01□□□□□ -0.971e-6■■■□□ 16.3
PTPRK-219ENST00000531050 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 CABS1Q96KC9 395 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 ABCC4O15439 1325 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 COQ9O75208 318 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 TXLNAP40222 546 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 FNTAP49354 379 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 PPP2R3AQ06190 1150 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 FAM71BQ8TC56 605 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 DDX11Q96FC9 970 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 BAG1Q99933 345 aaPredicted RBP9.01□□□□□ -0.97
PTPRK-219ENST00000531050 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 TEX13AQ9BXU3 409 aaPredicted RBP9.01□□□□□ -0.97
PTPRK-219ENST00000531050 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 ODF2LQ9ULJ1 636 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 CAMSAP1Q5T5Y3 1602 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 ADGRB1O14514 1584 aa9.01□□□□□ -0.97
PTPRK-219ENST00000531050 ABCC3O15438 1527 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 CHUKO15111 745 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 EIF3JO75822 258 aaKnown RBP9□□□□□ -0.97
PTPRK-219ENST00000531050 WLSQ5T9L3 541 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 POTEDQ86YR6 584 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 IMPACTQ9P2X3 320 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 L1RE1Q9UN81 338 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 TTC21AQ8NDW8 1320 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 ANKRD18BA2A2Z9 1011 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 AP1G2O75843 785 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 USP5P45974 858 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 ICA1Q05084 483 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 DHX40Q8IX18 779 aaKnown RBP9□□□□□ -0.97
PTPRK-219ENST00000531050 MRPL50Q8N5N7 158 aaKnown RBP9□□□□□ -0.97
PTPRK-219ENST00000531050 CCDC150Q8NCX0 1101 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 ARHGAP45Q92619 1136 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 SMC3Q9UQE7 1217 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 MRFAP1Q9Y605 127 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 FAM135BQ49AJ0 1406 aa9□□□□□ -0.97
PTPRK-219ENST00000531050 TMCO5BA8MYB1 307 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 DTNBO60941 627 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 PHACTR2O75167 634 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 NR1I2O75469 434 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 U2AF1L5P0DN76 240 aaPredicted RBP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 TMPOP42166 694 aaKnown RBP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 MTHFSP49914 203 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 RWDD2BP57060 319 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 CCT2P78371 535 aaKnown RBP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 SKIDA1Q1XH10 827 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 ARMC2Q8NEN0 867 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 GOLGA1Q92805 767 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 SUGCTQ9HAC7 445 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 PIK3C2BO00750 1634 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 MYO1FO00160 1098 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 INPP5BP32019 993 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 CCT5P48643 541 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 DHX8Q14562 1220 aaKnown RBP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 C1QTNF12Q5T7M4 302 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 WWC2Q6AWC2 1192 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 RUFY3Q7L099 469 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 IQCA1Q86XH1 822 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 MICAL1Q8TDZ2 1067 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 ERCC4Q92889 916 aaPredicted RBP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 TTC14Q96N46 770 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
PTPRK-219ENST00000531050 ANO2Q9NQ90 1003 aa8.99□□□□□ -0.97
PTPRK-219ENST00000531050 KINO60870 393 aaKnown RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 RDXP35241 583 aaKnown RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 KRT85P78386 507 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 ATP2B2Q01814 1243 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 TRAF1Q13077 416 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 ANKZF1Q9H8Y5 726 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 SPATS2LQ9NUQ6 558 aaKnown RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 RAB21Q9UL25 225 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 USP32Q8NFA0 1604 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 SHOX2O60902 331 aaPredicted RBP8.98□□□□□ -0.97
PTPRK-219ENST00000531050 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.977e-8■■□□□ 12.4
PTPRK-219ENST00000531050 GJB2P29033 226 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 RPS6KA3P51812 740 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 PSME1Q06323 249 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 MTA1Q13330 715 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 FAM173BQ6P4H8 233 aa8.98□□□□□ -0.97
PTPRK-219ENST00000531050 AMOTL1Q8IY63 956 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms