RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
CHKA-205ENST00000530730 ALAS2P22557 587 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 SPEM2Q0P670 501 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 ZNF280CQ8ND82 737 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 SLC30A3Q99726 388 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
CHKA-205ENST00000530730 AGLP35573 1532 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
CHKA-205ENST00000530730 PREX2Q70Z35 1606 aa11.43□□□□□ -0.58
CHKA-205ENST00000530730 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
CHKA-205ENST00000530730 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
CHKA-205ENST00000530730 KCNH4Q9UQ05 1017 aa11.43□□□□□ -0.58
CHKA-205ENST00000530730 RTN1Q16799 776 aa11.42□□□□□ -0.58
CHKA-205ENST00000530730 ARXQ96QS3 562 aa11.42□□□□□ -0.58
CHKA-205ENST00000530730 PRDM6Q9NQX0 595 aa11.42□□□□□ -0.58
CHKA-205ENST00000530730 PREX1Q8TCU6 1659 aa11.41□□□□□ -0.58
CHKA-205ENST00000530730 CFAP70Q5T0N1 1121 aa11.41□□□□□ -0.58
CHKA-205ENST00000530730 BTLAQ7Z6A9 289 aa11.41□□□□□ -0.58
CHKA-205ENST00000530730 HINFPQ9BQA5 517 aa11.41□□□□□ -0.58
CHKA-205ENST00000530730 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
CHKA-205ENST00000530730 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
CHKA-205ENST00000530730 KIDINS220Q9ULH0 1771 aa11.4□□□□□ -0.58
CHKA-205ENST00000530730 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.58
CHKA-205ENST00000530730 KIAA1107Q9UPP5 1409 aa11.4□□□□□ -0.58
CHKA-205ENST00000530730 SAMD9LQ8IVG5 1584 aa11.4□□□□□ -0.58
CHKA-205ENST00000530730 ZMYM3Q14202 1370 aa11.4□□□□□ -0.59
CHKA-205ENST00000530730 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.59
CHKA-205ENST00000530730 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
CHKA-205ENST00000530730 ZNF644Q9H582 1327 aaPredicted RBP11.39□□□□□ -0.59
CHKA-205ENST00000530730 CDC42BPAQ5VT25 1732 aa11.39□□□□□ -0.59
CHKA-205ENST00000530730 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
CHKA-205ENST00000530730 PTPRTO14522 1441 aa11.38□□□□□ -0.59
CHKA-205ENST00000530730 TGFBR3LH3BV60 316 aa11.38□□□□□ -0.59
CHKA-205ENST00000530730 SYCP2Q9BX26 1530 aa11.38□□□□□ -0.59
CHKA-205ENST00000530730 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
CHKA-205ENST00000530730 C3P01024 1663 aa11.37□□□□□ -0.59
CHKA-205ENST00000530730 FOXO3O43524 673 aa11.37□□□□□ -0.59
CHKA-205ENST00000530730 WEE1P30291 646 aa11.37□□□□□ -0.59
CHKA-205ENST00000530730 GGT6Q6P531 493 aa11.37□□□□□ -0.59
CHKA-205ENST00000530730 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
CHKA-205ENST00000530730 ADAM23O75077 832 aa11.36□□□□□ -0.59
CHKA-205ENST00000530730 ADH7P40394 386 aa11.36□□□□□ -0.59
CHKA-205ENST00000530730 PLVAPQ9BX97 442 aa11.36□□□□□ -0.59
CHKA-205ENST00000530730 DMGDHQ9UI17 866 aaKnown RBP11.36□□□□□ -0.59
CHKA-205ENST00000530730 STARD13Q9Y3M8 1113 aa11.36□□□□□ -0.59
CHKA-205ENST00000530730 PLEKHH2Q8IVE3 1493 aa11.36□□□□□ -0.59
CHKA-205ENST00000530730 NPATQ14207 1427 aa11.35□□□□□ -0.59
CHKA-205ENST00000530730 SPATA31C1P0DKV0 1188 aa11.35□□□□□ -0.59
CHKA-205ENST00000530730 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
CHKA-205ENST00000530730 A2MP01023 1474 aa11.35□□□□□ -0.59
CHKA-205ENST00000530730 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
CHKA-205ENST00000530730 C1QTNF9BB2RNN3 333 aa11.34□□□□□ -0.59
CHKA-205ENST00000530730 BAG6P46379 1132 aa11.34□□□□□ -0.59
CHKA-205ENST00000530730 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
CHKA-205ENST00000530730 CD163Q86VB7 1156 aa11.34□□□□□ -0.59
CHKA-205ENST00000530730 C11orf16Q9NQ32 467 aa11.34□□□□□ -0.59
CHKA-205ENST00000530730 BCS1LQ9Y276 419 aa11.34□□□□□ -0.59
CHKA-205ENST00000530730 ATP7AQ04656 1500 aa11.34□□□□□ -0.59
CHKA-205ENST00000530730 M0R082 166 aa11.33□□□□□ -0.6
CHKA-205ENST00000530730 MICALL1Q8N3F8 863 aa11.33□□□□□ -0.6
CHKA-205ENST00000530730 ZNF417Q8TAU3 575 aa11.33□□□□□ -0.6
CHKA-205ENST00000530730 MYO19Q96H55 970 aa11.33□□□□□ -0.6
CHKA-205ENST00000530730 ZNF587Q96SQ5 575 aaPredicted RBP11.33□□□□□ -0.6
CHKA-205ENST00000530730 MBD5Q9P267 1494 aa11.32□□□□□ -0.6
CHKA-205ENST00000530730 C20orf204Q6ZNR8 217 aa11.32□□□□□ -0.6
CHKA-205ENST00000530730 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
CHKA-205ENST00000530730 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
CHKA-205ENST00000530730 ALBP02768 609 aa11.31□□□□□ -0.6
CHKA-205ENST00000530730 EPB42P16452 691 aa11.31□□□□□ -0.6
CHKA-205ENST00000530730 CHRNA4P43681 627 aa11.31□□□□□ -0.6
CHKA-205ENST00000530730 BHMTQ93088 406 aa11.31□□□□□ -0.6
CHKA-205ENST00000530730 GSX2Q9BZM3 304 aa11.31□□□□□ -0.6
CHKA-205ENST00000530730 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
CHKA-205ENST00000530730 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
CHKA-205ENST00000530730 DHX29Q7Z478 1369 aaKnown RBP11.3□□□□□ -0.6
CHKA-205ENST00000530730 PLXNC1O60486 1568 aa11.3□□□□□ -0.6
CHKA-205ENST00000530730 INO80Q9ULG1 1556 aaPredicted RBP11.3□□□□□ -0.6
CHKA-205ENST00000530730 RTEL1-TNFRSF6BF6WH68 1400 aa11.3□□□□□ -0.6
CHKA-205ENST00000530730 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
CHKA-205ENST00000530730 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
CHKA-205ENST00000530730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHKA-205ENST00000530730 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
CHKA-205ENST00000530730 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
CHKA-205ENST00000530730 KIF3BO15066 747 aa11.29□□□□□ -0.6
CHKA-205ENST00000530730 NID1P14543 1247 aa11.29□□□□□ -0.6
CHKA-205ENST00000530730 ELOAQ14241 798 aaKnown RBP11.29□□□□□ -0.6
CHKA-205ENST00000530730 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
CHKA-205ENST00000530730 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
CHKA-205ENST00000530730 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
CHKA-205ENST00000530730 MROH2AA6NES4 1674 aa11.28□□□□□ -0.6
CHKA-205ENST00000530730 INPP5BP32019 993 aa11.28□□□□□ -0.6
CHKA-205ENST00000530730 CCINQ13939 588 aa11.28□□□□□ -0.6
CHKA-205ENST00000530730 PRRT3Q5FWE3 981 aa11.28□□□□□ -0.6
CHKA-205ENST00000530730 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.6
CHKA-205ENST00000530730 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
CHKA-205ENST00000530730 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.61
CHKA-205ENST00000530730 K7ELQ4 463 aaPredicted RBP11.27□□□□□ -0.61
CHKA-205ENST00000530730 LGR5O75473 907 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms