RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
C11orf54-209ENST00000530620 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
C11orf54-209ENST00000530620 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
C11orf54-209ENST00000530620 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
C11orf54-209ENST00000530620 ZNF428Q96B54 188 aa13.92□□□□□ -0.18
C11orf54-209ENST00000530620 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
C11orf54-209ENST00000530620 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
C11orf54-209ENST00000530620 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
C11orf54-209ENST00000530620 LAS1LQ9Y4W2 734 aaKnown RBP13.92□□□□□ -0.18
C11orf54-209ENST00000530620 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
C11orf54-209ENST00000530620 TCIRG1Q13488 830 aa13.91□□□□□ -0.18
C11orf54-209ENST00000530620 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
C11orf54-209ENST00000530620 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
C11orf54-209ENST00000530620 SH3TC1Q8TE82 1336 aa13.9□□□□□ -0.18
C11orf54-209ENST00000530620 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
C11orf54-209ENST00000530620 RASSF10A6NK89 507 aa13.9□□□□□ -0.18
C11orf54-209ENST00000530620 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
C11orf54-209ENST00000530620 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.18
C11orf54-209ENST00000530620 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
C11orf54-209ENST00000530620 TRMT112Q9UI30 125 aaKnown RBP13.9□□□□□ -0.18
C11orf54-209ENST00000530620 POLR2AP24928 1970 aaKnown RBP13.89□□□□□ -0.19
C11orf54-209ENST00000530620 SCN9AQ15858 1988 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 GRAPQ13588 217 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 DPP8Q6V1X1 898 aaPredicted RBP13.89□□□□□ -0.19
C11orf54-209ENST00000530620 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
C11orf54-209ENST00000530620 GPRC5DQ9NZD1 345 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.89□□□□□ -0.19
C11orf54-209ENST00000530620 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 ABT1Q9ULW3 272 aaKnown RBP13.89□□□□□ -0.19
C11orf54-209ENST00000530620 ADAMTS8Q9UP79 889 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 MYH3P11055 1940 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 PSME4Q14997 1843 aa13.89□□□□□ -0.19
C11orf54-209ENST00000530620 TRAF5O00463 557 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 BBOX1O75936 387 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 CXCL9Q07325 125 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 DEFB115Q30KQ5 88 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 USP50Q70EL3 339 aaPredicted RBP13.88□□□□□ -0.19
C11orf54-209ENST00000530620 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
C11orf54-209ENST00000530620 MPNDQ8N594 471 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 PLBD2Q8NHP8 589 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 VPS33BQ9H267 617 aa13.88□□□□□ -0.19
C11orf54-209ENST00000530620 HOXB7P09629 217 aa13.87□□□□□ -0.19
C11orf54-209ENST00000530620 GMPSP49915 693 aaPredicted RBP13.87□□□□□ -0.19
C11orf54-209ENST00000530620 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
C11orf54-209ENST00000530620 AIDAQ96BJ3 306 aa13.87□□□□□ -0.19
C11orf54-209ENST00000530620 ADARB2Q9NS39 739 aaKnown RBP13.87□□□□□ -0.19
C11orf54-209ENST00000530620 WBP1LQ9NX94 342 aa13.87□□□□□ -0.19
C11orf54-209ENST00000530620 DBF4Q9UBU7 674 aaPredicted RBP13.87□□□□□ -0.19
C11orf54-209ENST00000530620 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
C11orf54-209ENST00000530620 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 RAD17O75943 681 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 CIAPIN1Q6FI81 312 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 PAXIP1Q6ZW49 1069 aaPredicted RBP13.86□□□□□ -0.19
C11orf54-209ENST00000530620 FAM89AQ96GI7 184 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 ISCA1Q9BUE6 129 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 PRDM10Q9NQV6 1147 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 MBIPQ9NS73 344 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 CDHR2Q9BYE9 1310 aa13.86□□□□□ -0.19
C11orf54-209ENST00000530620 CTCFP49711 727 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-209ENST00000530620 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
C11orf54-209ENST00000530620 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
C11orf54-209ENST00000530620 YDJCA8MPS7 323 aa13.84□□□□□ -0.19
C11orf54-209ENST00000530620 LBX1P52954 281 aa13.84□□□□□ -0.19
C11orf54-209ENST00000530620 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-209ENST00000530620 CST9Q5W186 159 aa13.84□□□□□ -0.19
C11orf54-209ENST00000530620 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
C11orf54-209ENST00000530620 PRKRIP1Q9H875 184 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-209ENST00000530620 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
C11orf54-209ENST00000530620 SHTN1A0MZ66 631 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 HSPA8P11142 646 aaKnown RBP13.83□□□□□ -0.2
C11orf54-209ENST00000530620 GRM1Q13255 1194 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
C11orf54-209ENST00000530620 CYP4F22Q6NT55 531 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 TRPM4Q8TD43 1214 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 BCL2L13Q9BXK5 485 aa13.83□□□□□ -0.2
C11orf54-209ENST00000530620 GLIS2Q9BZE0 524 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-209ENST00000530620 ZNF646O15015 1829 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-209ENST00000530620 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-209ENST00000530620 TNIP1Q15025 636 aa13.82□□□□□ -0.2
C11orf54-209ENST00000530620 TLL2Q9Y6L7 1015 aa13.82□□□□□ -0.2
C11orf54-209ENST00000530620 IRS4O14654 1257 aaPredicted RBP13.81□□□□□ -0.2
C11orf54-209ENST00000530620 APAF1O14727 1248 aa13.81□□□□□ -0.2
C11orf54-209ENST00000530620 GPSM2P81274 684 aa13.81□□□□□ -0.2
C11orf54-209ENST00000530620 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
C11orf54-209ENST00000530620 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
C11orf54-209ENST00000530620 PHAXQ9H814 394 aaKnown RBP13.81□□□□□ -0.2
C11orf54-209ENST00000530620 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
C11orf54-209ENST00000530620 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
C11orf54-209ENST00000530620 NSFL1CQ9UNZ2 370 aaKnown RBP13.81□□□□□ -0.2
C11orf54-209ENST00000530620 CASP8AP2Q9UKL3 1982 aa13.8□□□□□ -0.2
C11orf54-209ENST00000530620 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
C11orf54-209ENST00000530620 CELF2O95319 508 aaKnown RBP13.8□□□□□ -0.2
C11orf54-209ENST00000530620 ECE1P42892 770 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms