RNA–Protein interactions for RNA: ENST00000528663.1

CYHR1-208, Transcript of cysteine and histidine rich 1, humanhuman

TSL 1 (best)

Gene CYHR1, Length 5,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYHR1-208ENST00000528663 PARP3Q9Y6F1 533 aa17.25■□□□□ 0.35
CYHR1-208ENST00000528663 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
CYHR1-208ENST00000528663 ATP10AO60312 1499 aa17.25■□□□□ 0.35
CYHR1-208ENST00000528663 MCM3P25205 808 aa17.25■□□□□ 0.35
CYHR1-208ENST00000528663 CASQ1P31415 396 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 TBCAO75347 108 aaKnown RBP17.24■□□□□ 0.35
CYHR1-208ENST00000528663 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 EYA3Q99504 573 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 CFAP43Q8NDM7 1665 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 PDCL2Q8N4E4 241 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 GDPD2Q9HCC8 539 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
CYHR1-208ENST00000528663 PAFAH1B1P43034 410 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 TCERG1LQ5VWI1 586 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 PA2G4Q9UQ80 394 aaKnown RBP17.23■□□□□ 0.35
CYHR1-208ENST00000528663 HSPA2P54652 639 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 BIN1O00499 593 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 MAP9Q49MG5 647 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 ZNF165P49910 485 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
CYHR1-208ENST00000528663 CRACR2AQ9BSW2 395 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 RTL9Q8NET4 1388 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
CYHR1-208ENST00000528663 SYKP43405 635 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 FAM193AP78312 1265 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 PANK2Q9BZ23 570 aa17.23■□□□□ 0.35
CYHR1-208ENST00000528663 RAD50Q92878 1312 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
CYHR1-208ENST00000528663 Q6ZUG5 572 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 USP25Q9UHP3 1055 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 HOXB7P09629 217 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 KLHL40Q2TBA0 621 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 LMTK3Q96Q04 1460 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 GOLGA6L9A6NEM1 432 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
CYHR1-208ENST00000528663 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
CYHR1-208ENST00000528663 PRC1O43663 620 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 LIG1P18858 919 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 POLD1P28340 1107 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 NBPF14Q5TI25 921 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 LUZP1Q86V48 1076 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.21■□□□□ 0.35
CYHR1-208ENST00000528663 TMCO3Q6UWJ1 677 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 PARP10Q53GL7 1025 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 ALS2CR12Q96Q35 445 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 BTG4Q9NY30 223 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 CALML3P27482 149 aa17.21■□□□□ 0.35
CYHR1-208ENST00000528663 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
CYHR1-208ENST00000528663 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
CYHR1-208ENST00000528663 PICALMQ13492 652 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 PKNOX2Q96KN3 472 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 USP37Q86T82 979 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 MAST1Q9Y2H9 1570 aa17.2■□□□□ 0.34
CYHR1-208ENST00000528663 TFCP2Q12800 502 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 CCDC172P0C7W6 258 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 NAPAP54920 295 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 TRIM47Q96LD4 638 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
CYHR1-208ENST00000528663 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 CCDC174Q6PII3 467 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 PLBD2Q8NHP8 589 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 SNX21Q969T3 373 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 ATP7AQ04656 1500 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 B4DLN1 442 aa17.19■□□□□ 0.34
CYHR1-208ENST00000528663 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
CYHR1-208ENST00000528663 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
CYHR1-208ENST00000528663 STAT6P42226 847 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
CYHR1-208ENST00000528663 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
CYHR1-208ENST00000528663 SPAG1Q07617 926 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
CYHR1-208ENST00000528663 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
CYHR1-208ENST00000528663 NF2P35240 595 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 MAGEB6Q8N7X4 407 aa17.18■□□□□ 0.34
CYHR1-208ENST00000528663 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
CYHR1-208ENST00000528663 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
CYHR1-208ENST00000528663 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms