RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
CLNS1A-207ENST00000527133 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.32
CLNS1A-207ENST00000527133 CSRNP1Q96S65 589 aa17.02■□□□□ 0.32
CLNS1A-207ENST00000527133 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
CLNS1A-207ENST00000527133 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
CLNS1A-207ENST00000527133 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
CLNS1A-207ENST00000527133 CDCA5Q96FF9 252 aa17.01■□□□□ 0.31
CLNS1A-207ENST00000527133 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
CLNS1A-207ENST00000527133 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
CLNS1A-207ENST00000527133 CTU1Q7Z7A3 348 aaKnown RBP17■□□□□ 0.31
CLNS1A-207ENST00000527133 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
CLNS1A-207ENST00000527133 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
CLNS1A-207ENST00000527133 ZC3H12CQ9C0D7 883 aaKnown RBP17■□□□□ 0.31
CLNS1A-207ENST00000527133 G3V3G9 751 aa16.99■□□□□ 0.31
CLNS1A-207ENST00000527133 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
CLNS1A-207ENST00000527133 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
CLNS1A-207ENST00000527133 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
CLNS1A-207ENST00000527133 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
CLNS1A-207ENST00000527133 RASAL3Q86YV0 1011 aa16.99■□□□□ 0.31
CLNS1A-207ENST00000527133 SCN9AQ15858 1988 aa16.98■□□□□ 0.31
CLNS1A-207ENST00000527133 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
CLNS1A-207ENST00000527133 RPS8P62241 208 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-207ENST00000527133 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
CLNS1A-207ENST00000527133 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-207ENST00000527133 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-207ENST00000527133 UFL1O94874 794 aa16.97■□□□□ 0.31
CLNS1A-207ENST00000527133 SCARF1Q14162 830 aa16.97■□□□□ 0.31
CLNS1A-207ENST00000527133 PRPF38BQ5VTL8 546 aaKnown RBP16.97■□□□□ 0.31
CLNS1A-207ENST00000527133 CHL1O00533 1208 aa16.96■□□□□ 0.31
CLNS1A-207ENST00000527133 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.31
CLNS1A-207ENST00000527133 NEUROD2Q15784 382 aa16.96■□□□□ 0.31
CLNS1A-207ENST00000527133 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
CLNS1A-207ENST00000527133 ANKIB1Q9P2G1 1089 aa16.96■□□□□ 0.31
CLNS1A-207ENST00000527133 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.31
CLNS1A-207ENST00000527133 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
CLNS1A-207ENST00000527133 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
CLNS1A-207ENST00000527133 PODXL2Q9NZ53 605 aa16.95■□□□□ 0.3
CLNS1A-207ENST00000527133 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
CLNS1A-207ENST00000527133 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
CLNS1A-207ENST00000527133 FKBP1BP68106 108 aa16.94■□□□□ 0.3
CLNS1A-207ENST00000527133 MOB2Q70IA6 237 aa16.94■□□□□ 0.3
CLNS1A-207ENST00000527133 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
CLNS1A-207ENST00000527133 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
CLNS1A-207ENST00000527133 SCAF8Q9UPN6 1271 aaKnown RBP16.94■□□□□ 0.3
CLNS1A-207ENST00000527133 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
CLNS1A-207ENST00000527133 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
CLNS1A-207ENST00000527133 MYOZ2Q9NPC6 264 aa16.93■□□□□ 0.3
CLNS1A-207ENST00000527133 HYPKQ9NX55 129 aa16.93■□□□□ 0.3
CLNS1A-207ENST00000527133 ZNF609O15014 1411 aa16.93■□□□□ 0.3
CLNS1A-207ENST00000527133 UBE2Q2LH0YL09 131 aa16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 HOXB7P09629 217 aa16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 ZNF296Q8WUU4 475 aaPredicted RBP16.92■□□□□ 0.3
CLNS1A-207ENST00000527133 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
CLNS1A-207ENST00000527133 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
CLNS1A-207ENST00000527133 GMLQ99445 158 aa16.91■□□□□ 0.3
CLNS1A-207ENST00000527133 MKI67P46013 3256 aaKnown RBP16.91■□□□□ 0.3
CLNS1A-207ENST00000527133 PITPNM2Q9BZ72 1349 aa16.91■□□□□ 0.3
CLNS1A-207ENST00000527133 TTLL12Q14166 644 aaPredicted RBP16.9■□□□□ 0.3
CLNS1A-207ENST00000527133 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
CLNS1A-207ENST00000527133 RIC3Q7Z5B4 369 aa16.9■□□□□ 0.3
CLNS1A-207ENST00000527133 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
CLNS1A-207ENST00000527133 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 XDHP47989 1333 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 HTTP42858 3142 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 PSME4Q14997 1843 aa16.89■□□□□ 0.29
CLNS1A-207ENST00000527133 NBPF9Q3BBW0 867 aa16.88■□□□□ 0.29
CLNS1A-207ENST00000527133 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
CLNS1A-207ENST00000527133 MYD88Q99836 296 aa16.88■□□□□ 0.29
CLNS1A-207ENST00000527133 CENPFP49454 3210 aa16.87■□□□□ 0.29
CLNS1A-207ENST00000527133 GPR25O00155 361 aa16.87■□□□□ 0.29
CLNS1A-207ENST00000527133 PODNQ7Z5L7 613 aa16.87■□□□□ 0.29
CLNS1A-207ENST00000527133 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
CLNS1A-207ENST00000527133 PDE8AO60658 829 aa16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 ATP2B4P23634 1241 aa16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 TM4SF4P48230 202 aa16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 MXD3Q9BW11 206 aa16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 PHAXQ9H814 394 aaKnown RBP16.86■□□□□ 0.29
CLNS1A-207ENST00000527133 WTIPA6NIX2 430 aaPredicted RBP16.85■□□□□ 0.29
CLNS1A-207ENST00000527133 RALBP1Q15311 655 aa16.85■□□□□ 0.29
CLNS1A-207ENST00000527133 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
CLNS1A-207ENST00000527133 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
CLNS1A-207ENST00000527133 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
CLNS1A-207ENST00000527133 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
CLNS1A-207ENST00000527133 NF2P35240 595 aa16.84■□□□□ 0.29
CLNS1A-207ENST00000527133 SREBF2Q12772 1141 aa16.84■□□□□ 0.29
CLNS1A-207ENST00000527133 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
CLNS1A-207ENST00000527133 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms