RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 ATP2B4P23634 1241 aa23.38■■□□□ 1.33
TSPAN4-216ENST00000526055 IGHMBP2P38935 993 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-216ENST00000526055 USP50Q70EL3 339 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-216ENST00000526055 DNAJC5GQ8N7S2 189 aa23.38■■□□□ 1.33
TSPAN4-216ENST00000526055 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
TSPAN4-216ENST00000526055 SRCIN1Q9C0H9 1055 aa23.38■■□□□ 1.33
TSPAN4-216ENST00000526055 GRM8O00222 908 aa23.37■■□□□ 1.33
TSPAN4-216ENST00000526055 ITGA6P23229 1130 aa23.37■■□□□ 1.33
TSPAN4-216ENST00000526055 GPRC5DQ9NZD1 345 aa23.37■■□□□ 1.33
TSPAN4-216ENST00000526055 YDJCA8MPS7 323 aa23.36■■□□□ 1.33
TSPAN4-216ENST00000526055 EPS15P42566 896 aa23.36■■□□□ 1.33
TSPAN4-216ENST00000526055 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
TSPAN4-216ENST00000526055 MINPP1Q9UNW1 487 aa23.36■■□□□ 1.33
TSPAN4-216ENST00000526055 CLEC11AQ9Y240 323 aa23.36■■□□□ 1.33
TSPAN4-216ENST00000526055 ADAMTSL1Q8N6G6 1762 aa23.36■■□□□ 1.33
TSPAN4-216ENST00000526055 RIMBP2O15034 1052 aa23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 RAD17O75943 681 aa23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 FAM161AQ3B820 660 aa23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 SLC4A10Q6U841 1118 aa23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 DBNDD1Q9H9R9 158 aa23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 ADARB2Q9NS39 739 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 C9orf78Q9NZ63 289 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-216ENST00000526055 ECE2O60344 883 aa23.34■■□□□ 1.33
TSPAN4-216ENST00000526055 GMPSP49915 693 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-216ENST00000526055 DPF2Q92785 391 aa23.34■■□□□ 1.33
TSPAN4-216ENST00000526055 MPHOSPH8Q99549 860 aa23.34■■□□□ 1.33
TSPAN4-216ENST00000526055 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
TSPAN4-216ENST00000526055 PCNTO95613 3336 aa23.34■■□□□ 1.33
TSPAN4-216ENST00000526055 PASKQ96RG2 1323 aa23.33■■□□□ 1.33
TSPAN4-216ENST00000526055 ANKRD18BA2A2Z9 1011 aa23.33■■□□□ 1.33
TSPAN4-216ENST00000526055 RPS12P25398 132 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-216ENST00000526055 FOXO4P98177 505 aa23.33■■□□□ 1.33
TSPAN4-216ENST00000526055 ANKRD2Q9GZV1 360 aa23.33■■□□□ 1.33
TSPAN4-216ENST00000526055 G3V3G9 751 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 ITGBL1O95965 494 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 DCAF8Q5TAQ9 597 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 MIER1Q8N108 512 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 KLRG1Q96E93 195 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 CREBZFQ9NS37 354 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 UTYO14607 1347 aa23.32■■□□□ 1.32
TSPAN4-216ENST00000526055 PSMD14O00487 310 aa23.31■■□□□ 1.32
TSPAN4-216ENST00000526055 BRPF1P55201 1214 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-216ENST00000526055 DOK7Q18PE1 504 aa23.31■■□□□ 1.32
TSPAN4-216ENST00000526055 CNTROBQ8N137 903 aa23.31■■□□□ 1.32
TSPAN4-216ENST00000526055 MED23Q9ULK4 1368 aa23.3■■□□□ 1.32
TSPAN4-216ENST00000526055 CCT4P50991 539 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-216ENST00000526055 GPR101Q96P66 508 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-216ENST00000526055 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
TSPAN4-216ENST00000526055 H7C1D1 291 aa23.29■■□□□ 1.32
TSPAN4-216ENST00000526055 HTRA3P83110 453 aa23.29■■□□□ 1.32
TSPAN4-216ENST00000526055 LMBR1LQ6UX01 489 aa23.29■■□□□ 1.32
TSPAN4-216ENST00000526055 PODNQ7Z5L7 613 aa23.29■■□□□ 1.32
TSPAN4-216ENST00000526055 ZC3H15Q8WU90 426 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-216ENST00000526055 CNOT7Q9UIV1 285 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-216ENST00000526055 ZNF609O15014 1411 aa23.28■■□□□ 1.32
TSPAN4-216ENST00000526055 VIL1P09327 827 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-216ENST00000526055 CCDC57Q2TAC2 916 aa23.28■■□□□ 1.32
TSPAN4-216ENST00000526055 MAP1SQ66K74 1059 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-216ENST00000526055 PGAP2Q9UHJ9 254 aa23.27■■□□□ 1.32
TSPAN4-216ENST00000526055 CHMP3Q9Y3E7 222 aa23.27■■□□□ 1.32
TSPAN4-216ENST00000526055 EPHA10Q5JZY3 1008 aa23.26■■□□□ 1.31
TSPAN4-216ENST00000526055 MICALL2Q8IY33 904 aa23.26■■□□□ 1.31
TSPAN4-216ENST00000526055 JMYQ8N9B5 988 aa23.26■■□□□ 1.31
TSPAN4-216ENST00000526055 TMEM88BA6NKF7 163 aa23.25■■□□□ 1.31
TSPAN4-216ENST00000526055 CHRNDQ07001 517 aa23.25■■□□□ 1.31
TSPAN4-216ENST00000526055 AGBL3Q8NEM8 1001 aa23.25■■□□□ 1.31
TSPAN4-216ENST00000526055 COA1Q9GZY4 146 aa23.25■■□□□ 1.31
TSPAN4-216ENST00000526055 ZBTB12Q9Y330 459 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-216ENST00000526055 ZNF804BA4D1E1 1349 aa23.25■■□□□ 1.31
TSPAN4-216ENST00000526055 NBPF7P0C2Y1 421 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-216ENST00000526055 TAF7LQ5H9L4 462 aa23.24■■□□□ 1.31
TSPAN4-216ENST00000526055 SUCLG2Q96I99 432 aa23.24■■□□□ 1.31
TSPAN4-216ENST00000526055 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
TSPAN4-216ENST00000526055 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
TSPAN4-216ENST00000526055 RABL6Q3YEC7 729 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-216ENST00000526055 API5Q9BZZ5 524 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-216ENST00000526055 USP17L3A6NCW0 530 aa23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 USP17L4A6NCW7 530 aa23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 KCNJ4P48050 445 aa23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 RSBN1LQ6PCB5 846 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 LDHAL6AQ6ZMR3 332 aa23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 C15orf52Q6ZUT6 534 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 USP17L1Q7RTZ2 530 aa23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 KAZALD1Q96I82 304 aa23.22■■□□□ 1.31
TSPAN4-216ENST00000526055 SCN9AQ15858 1988 aa23.21■■□□□ 1.31
TSPAN4-216ENST00000526055 HIRAP54198 1017 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-216ENST00000526055 TRPM4Q8TD43 1214 aa23.21■■□□□ 1.31
TSPAN4-216ENST00000526055 USP44Q9H0E7 712 aa23.21■■□□□ 1.31
TSPAN4-216ENST00000526055 KIF16BQ96L93 1317 aa23.21■■□□□ 1.31
TSPAN4-216ENST00000526055 WTIPA6NIX2 430 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-216ENST00000526055 MMP14P50281 582 aa23.2■■□□□ 1.3
TSPAN4-216ENST00000526055 IFFO2Q5TF58 517 aa23.2■■□□□ 1.3
TSPAN4-216ENST00000526055 ARHGAP45Q92619 1136 aa23.2■■□□□ 1.3
TSPAN4-216ENST00000526055 NOB1Q9ULX3 412 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-216ENST00000526055 PSME4Q14997 1843 aa23.19■■□□□ 1.3
TSPAN4-216ENST00000526055 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
TSPAN4-216ENST00000526055 STRIP1Q5VSL9 837 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms