RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 NLRP3Q96P20 1036 aa4.61□□□□□ -1.67
HDAC2-215ENST00000523334 NOL10Q9BSC4 688 aaKnown RBP4.61□□□□□ -1.67
HDAC2-215ENST00000523334 RTN4Q9NQC3 1192 aaKnown RBP4.61□□□□□ -1.67
HDAC2-215ENST00000523334 RAI14Q9P0K7 980 aa4.61□□□□□ -1.67
HDAC2-215ENST00000523334 RTCBQ9Y3I0 505 aaKnown RBP4.61□□□□□ -1.67
HDAC2-215ENST00000523334 USP42Q9H9J4 1324 aaKnown RBP4.6□□□□□ -1.67
HDAC2-215ENST00000523334 ZNF213O14771 459 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 RFC4P35249 363 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 FOSBP53539 338 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 KRT85P78386 507 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 SART3Q15020 963 aaKnown RBP4.6□□□□□ -1.67
HDAC2-215ENST00000523334 HLFQ16534 295 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 SLC9C2Q5TAH2 1124 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 RUFY3Q7L099 469 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 RASEFQ8IZ41 740 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 G3V3G9 751 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 GNPATO15228 680 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 GJB2P29033 226 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 TDO2P48775 406 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 PUM3Q15397 648 aaKnown RBP4.6□□□□□ -1.67
HDAC2-215ENST00000523334 DCAF8Q5TAQ9 597 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 CCDC129Q6ZRS4 1044 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 NECAB1Q8N987 351 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 MAP4K1Q92918 833 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 GREM2Q9H772 168 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 CCNL1Q9UK58 526 aaPredicted RBP4.6□□□□□ -1.67
HDAC2-215ENST00000523334 HAND2P61296 217 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 FOXO4P98177 505 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 KLHL40Q2TBA0 621 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 RRP12Q5JTH9 1297 aaKnown RBP4.6□□□□□ -1.67
HDAC2-215ENST00000523334 TPTE2Q6XPS3 522 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 FERMT3Q86UX7 667 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 BICD2Q8TD16 824 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 BRF1Q92994 677 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 DDX11Q96FC9 970 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 NYXQ9GZU5 481 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 NAPBQ9H115 298 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 SPATA31A1Q5TZJ5 1347 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 AKAP17AQ02040 695 aaKnown RBP4.6□□□□□ -1.67
HDAC2-215ENST00000523334 TRIM29Q14134 588 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 LPIN2Q92539 896 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 APPBP2Q92624 585 aa4.6□□□□□ -1.67
HDAC2-215ENST00000523334 PALLDQ8WX93 1383 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 TAF5LO75529 589 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 RFX5P48382 616 aaPredicted RBP4.59□□□□□ -1.67
HDAC2-215ENST00000523334 HMGN5P82970 282 aaKnown RBP4.59□□□□□ -1.67
HDAC2-215ENST00000523334 AMOTL1Q8IY63 956 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 TTLL11Q8NHH1 800 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 PDE8BO95263 885 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 ZSCAN22P10073 491 aaPredicted RBP4.59□□□□□ -1.67
HDAC2-215ENST00000523334 RPS6KB1P23443 525 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 ZAP70P43403 619 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 DHX32Q7L7V1 743 aaKnown RBP4.59□□□□□ -1.67
HDAC2-215ENST00000523334 MARCH10Q8NA82 808 aaPredicted RBP4.59□□□□□ -1.67
HDAC2-215ENST00000523334 SEC62Q99442 399 aaKnown RBP4.59□□□□□ -1.67
HDAC2-215ENST00000523334 LRRC2Q9BYS8 371 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 MROH5Q6ZUA9 1318 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 CDHR2Q9BYE9 1310 aa4.59□□□□□ -1.67
HDAC2-215ENST00000523334 NASPP49321 788 aaPredicted RBP4.59□□□□□ -1.68
HDAC2-215ENST00000523334 CHAF1AQ13111 956 aaPredicted RBP4.59□□□□□ -1.68
HDAC2-215ENST00000523334 Q6ZUG5 572 aa4.59□□□□□ -1.68
HDAC2-215ENST00000523334 NCOA7Q8NI08 942 aa4.59□□□□□ -1.68
HDAC2-215ENST00000523334 GRPEL1Q9HAV7 217 aa4.59□□□□□ -1.68
HDAC2-215ENST00000523334 ZSWIM6Q9HCJ5 1215 aa4.59□□□□□ -1.68
HDAC2-215ENST00000523334 ABCC6O95255 1503 aa4.59□□□□□ -1.68
HDAC2-215ENST00000523334 ADORA1P30542 326 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 MCM5P33992 734 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 CUL4AQ13619 759 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SYNE4Q8N205 404 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 GDPD2Q9HCC8 539 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 IQSEC3Q9UPP2 1182 aaPredicted RBP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 JCADQ9P266 1359 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SYT1P21579 422 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 EIF5P55010 431 aaKnown RBP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 CCT2P78371 535 aaKnown RBP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SAFBQ15424 915 aaKnown RBP eCLIP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SPATA31A5Q5VU36 1347 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 ATG9AQ7Z3C6 839 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 ZNF589Q86UQ0 364 aaPredicted RBP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SPATA31A7Q8IWB4 1347 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 DSCC1Q9BVC3 393 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 BRPF3Q9ULD4 1205 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 NECTIN1Q15223 517 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 ADCK5Q3MIX3 580 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 ZMYM1Q5SVZ6 1142 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 TRAPPC3LQ5T215 181 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SUSD4Q5VX71 490 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 CCDC73Q6ZRK6 1079 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 BARGINQ6ZT62 677 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 TICAM2Q86XR7 235 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 ZNF396Q96N95 335 aaPredicted RBP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 PLA2G12BQ9BX93 195 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 ANKIB1Q9P2G1 1089 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 LMO7Q8WWI1 1683 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 GPAA1O43292 621 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 KCNQ2O43526 872 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 CDKL5O76039 1030 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 LETM1O95202 739 aaPredicted RBP4.58□□□□□ -1.68
HDAC2-215ENST00000523334 BRD1O95696 1058 aa4.58□□□□□ -1.68
HDAC2-215ENST00000523334 SLC3A2P08195 630 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms