RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, human

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNC-208	ENST00000519617	KCNMB2	Q9Y691	235 aa		4.2	□□□□□ -1.74
CCNC-208	ENST00000519617	GSC2	O15499	205 aa		4.19	□□□□□ -1.74
CCNC-208	ENST00000519617	SSTR4	P31391	388 aa		4.19	□□□□□ -1.74
CCNC-208	ENST00000519617	RGL4	Q8IZJ4	473 aa		4.19	□□□□□ -1.74
CCNC-208	ENST00000519617	CALR3	Q96L12	384 aa	Known RBP	4.19	□□□□□ -1.74
CCNC-208	ENST00000519617	RBSN	Q9H1K0	784 aa		4.19	□□□□□ -1.74
CCNC-208	ENST00000519617	RAX	Q9Y2V3	346 aa		4.19	□□□□□ -1.74
CCNC-208	ENST00000519617	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	PAX4	O43316	350 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	PTCD1	O75127	700 aa	Known RBP	4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	MED26	O95402	600 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	IGLV1-40	P01703	118 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	LMOD1	P29536	600 aa	Predicted RBP	4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	COX20	Q5RI15	118 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	NLRP13	Q86W25	1043 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	FAM200A	Q8TCP9	573 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	NSUN5	Q96P11	429 aa	Known RBP	4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	FMNL2	Q96PY5	1086 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	UBL7	Q96S82	380 aa	Predicted RBP	4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	STOML1	Q9UBI4	398 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	TRIM33	Q9UPN9	1127 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	PPME1	Q9Y570	386 aa		4.18	□□□□□ -1.74
CCNC-208	ENST00000519617	TM4SF5	O14894	197 aa		4.17	□□□□□ -1.74
CCNC-208	ENST00000519617	COBL	O75128	1261 aa		4.17	□□□□□ -1.74
CCNC-208	ENST00000519617	TXK	P42681	527 aa		4.17	□□□□□ -1.74
CCNC-208	ENST00000519617	AGGF1	Q8N302	714 aa	eCLIP	4.17	□□□□□ -1.74
CCNC-208	ENST00000519617	GALNT11	Q8NCW6	608 aa		4.17	□□□□□ -1.74
CCNC-208	ENST00000519617		A6NJR5	290 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	GLB1	P16278	677 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	IRAK1	P51617	712 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	FKBP5	Q13451	457 aa	Predicted RBP	4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	ETFBKMT	Q8IXQ9	262 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	ARMC10	Q8N2F6	343 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	OR13H1	Q8NG92	308 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	CEP41	Q9BYV8	373 aa		4.16	□□□□□ -1.74
CCNC-208	ENST00000519617	LINC01387	J3KSC0	135 aa		4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	DHX15	O43143	795 aa	Known RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	TGFB1	P01137	390 aa		4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	BRD2	P25440	801 aa	Known RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	CD68	P34810	354 aa	Predicted RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	GP2	P55259	537 aa	Known RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	TRIP4	Q15650	581 aa	Predicted RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	UVSSA	Q2YD98	709 aa		4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	INTS5	Q6P9B9	1019 aa	Known RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	ZDHHC13	Q8IUH4	622 aa		4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	FAM46A	Q96IP4	442 aa	Known RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	OAS3	Q9Y6K5	1087 aa	Known RBP	4.15	□□□□□ -1.75
CCNC-208	ENST00000519617	WISP1	O95388	367 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	PRKCSH	P14314	528 aa	Predicted RBP	4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	SPINK2	P20155	84 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	CDC27	P30260	824 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	NFIA	Q12857	509 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	HYAL2	Q12891	473 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	SWI5	Q1ZZU3	235 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	CFAP70	Q5T0N1	1121 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	COL13A1	Q5TAT6	717 aa	Predicted RBP	4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	PIK3R5	Q8WYR1	880 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	COL26A1	Q96A83	441 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	SAP130	Q9H0E3	1048 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	FAM13B	Q9NYF5	915 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	KCNK4	Q9NYG8	393 aa		4.14	□□□□□ -1.75
CCNC-208	ENST00000519617	PRR19	A6NJB7	356 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	UBAP1L	F5GYI3	381 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	FSCN2	O14926	492 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	ADAMTS4	O75173	837 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	TAL1	P17542	331 aa	Predicted RBP	4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	RFX1	P22670	979 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	ATP11A	P98196	1134 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	OCLN	Q16625	522 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	FAM26D	Q5JW98	314 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	CEP135	Q66GS9	1140 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	RNF43	Q68DV7	783 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	C16orf46	Q6P387	395 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	KIAA1211	Q6ZU35	1233 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	ACAD11	Q709F0	780 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	KLHL23	Q8NBE8	558 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	UTP4	Q969X6	686 aa	Known RBP	4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	SPACA7	Q96KW9	195 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	PRIMPOL	Q96LW4	560 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	C7orf69	Q9H7B7	122 aa		4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	NOVA2	Q9UNW9	492 aa	Known RBP	4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	ACIN1	Q9UKV3	1341 aa	Known RBP	4.13	□□□□□ -1.75
CCNC-208	ENST00000519617	TNFRSF10B	O14763	440 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	KIF4A	O95239	1232 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	YBX3	P16989	372 aa	Known RBP eCLIP	4.12	□□□□□ -1.75	1e-6	■□□□□ 8.7
CCNC-208	ENST00000519617	GRIK1	P39086	918 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	FAM69C	Q0P6D2	419 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	ADAMTSL4	Q6UY14	1074 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	DTX1	Q86Y01	620 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	CLEC10A	Q8IUN9	316 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	TRIM42	Q8IWZ5	723 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	MYRFL	Q96LU7	910 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	FAM83C	Q9BQN1	747 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	DBNDD2	Q9BQY9	259 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	PBX4	Q9BYU1	374 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	LACRT	Q9GZZ8	138 aa		4.12	□□□□□ -1.75
CCNC-208	ENST00000519617	ADAM19	Q9H013	955 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms