RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
SH2D4A-202ENST00000518040 EYA3Q99504 573 aa13.04□□□□□ -0.32
SH2D4A-202ENST00000518040 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
SH2D4A-202ENST00000518040 GPR25O00155 361 aa13.03□□□□□ -0.32
SH2D4A-202ENST00000518040 EGFRP00533 1210 aa13.03□□□□□ -0.32
SH2D4A-202ENST00000518040 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
SH2D4A-202ENST00000518040 PAPPA2Q9BXP8 1791 aa13.03□□□□□ -0.32
SH2D4A-202ENST00000518040 FKTNO75072 461 aa13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 TBC1D8O95759 1140 aa13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 TM4SF4P48230 202 aa13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.32
SH2D4A-202ENST00000518040 DDX60Q8IY21 1712 aaKnown RBP13.02□□□□□ -0.33
SH2D4A-202ENST00000518040 NEFMP07197 916 aa13.02□□□□□ -0.33
SH2D4A-202ENST00000518040 SREBF2Q12772 1141 aa13.02□□□□□ -0.33
SH2D4A-202ENST00000518040 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
SH2D4A-202ENST00000518040 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
SH2D4A-202ENST00000518040 PITPNM2Q9BZ72 1349 aa13.02□□□□□ -0.33
SH2D4A-202ENST00000518040 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
SH2D4A-202ENST00000518040 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
SH2D4A-202ENST00000518040 ECE2O60344 883 aa13.01□□□□□ -0.33
SH2D4A-202ENST00000518040 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
SH2D4A-202ENST00000518040 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
SH2D4A-202ENST00000518040 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
SH2D4A-202ENST00000518040 ZNF609O15014 1411 aa13□□□□□ -0.33
SH2D4A-202ENST00000518040 C6orf229H3BNL8 230 aa13□□□□□ -0.33
SH2D4A-202ENST00000518040 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
SH2D4A-202ENST00000518040 TRMT112Q9UI30 125 aaKnown RBP13□□□□□ -0.33
SH2D4A-202ENST00000518040 LAMB2P55268 1798 aa13□□□□□ -0.33
SH2D4A-202ENST00000518040 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 RTL9Q8NET4 1388 aa12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 ZNF280AP59817 542 aaPredicted RBP12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 SCARF1Q14162 830 aa12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
SH2D4A-202ENST00000518040 G3V3G9 751 aa12.98□□□□□ -0.33
SH2D4A-202ENST00000518040 NF2P35240 595 aa12.98□□□□□ -0.33
SH2D4A-202ENST00000518040 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
SH2D4A-202ENST00000518040 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
SH2D4A-202ENST00000518040 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
SH2D4A-202ENST00000518040 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
SH2D4A-202ENST00000518040 SF3B3Q15393 1217 aaKnown RBP12.96□□□□□ -0.33
SH2D4A-202ENST00000518040 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
SH2D4A-202ENST00000518040 KCNQ5Q9NR82 932 aa12.96□□□□□ -0.33
SH2D4A-202ENST00000518040 ASTN2O75129 1339 aaPredicted RBP12.96□□□□□ -0.34
SH2D4A-202ENST00000518040 UBE2Q2LH0YL09 131 aa12.96□□□□□ -0.34
SH2D4A-202ENST00000518040 INHBEP58166 350 aa12.96□□□□□ -0.34
SH2D4A-202ENST00000518040 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.34
SH2D4A-202ENST00000518040 RSBN1LQ6PCB5 846 aaPredicted RBP12.96□□□□□ -0.34
SH2D4A-202ENST00000518040 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.34
SH2D4A-202ENST00000518040 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 GPSM2P81274 684 aa12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 PDIA6Q15084 440 aa12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 PODXL2Q9NZ53 605 aa12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 RBBP6Q7Z6E9 1792 aaKnown RBP12.95□□□□□ -0.34
SH2D4A-202ENST00000518040 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
SH2D4A-202ENST00000518040 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
SH2D4A-202ENST00000518040 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
SH2D4A-202ENST00000518040 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
SH2D4A-202ENST00000518040 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
SH2D4A-202ENST00000518040 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 MMP14P50281 582 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 MOB2Q70IA6 237 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 OTOP1Q7RTM1 612 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 ERO1AQ96HE7 468 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 BABAM1Q9NWV8 329 aa12.93□□□□□ -0.34
SH2D4A-202ENST00000518040 TAF1P21675 1872 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 ARMC5Q96C12 935 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 GMLQ99445 158 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 GGA1Q9UJY5 639 aa12.92□□□□□ -0.34
SH2D4A-202ENST00000518040 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 UFL1O94874 794 aa12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 ANKIB1Q9P2G1 1089 aa12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 SCN9AQ15858 1988 aa12.91□□□□□ -0.34
SH2D4A-202ENST00000518040 USP17L3A6NCW0 530 aa12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 USP17L4A6NCW7 530 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms