RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 SNAP23O00161 211 aa14.77□□□□□ -0.05
AP3B1-203ENST00000517940 CCDC57Q2TAC2 916 aa14.77□□□□□ -0.05
AP3B1-203ENST00000517940 CDC5LQ99459 802 aaKnown RBP14.77□□□□□ -0.05
AP3B1-203ENST00000517940 ZNF646O15015 1829 aaPredicted RBP14.77□□□□□ -0.05
AP3B1-203ENST00000517940 ARAP2Q8WZ64 1704 aa14.77□□□□□ -0.05
AP3B1-203ENST00000517940 GPSM2P81274 684 aa14.76□□□□□ -0.05
AP3B1-203ENST00000517940 SP8Q8IXZ3 490 aa14.76□□□□□ -0.05
AP3B1-203ENST00000517940 EYA2O00167 538 aa14.75□□□□□ -0.05
AP3B1-203ENST00000517940 RASSF7Q02833 373 aa14.75□□□□□ -0.05
AP3B1-203ENST00000517940 CHRNDQ07001 517 aa14.75□□□□□ -0.05
AP3B1-203ENST00000517940 RPAP2Q8IXW5 612 aaPredicted RBP14.75□□□□□ -0.05
AP3B1-203ENST00000517940 GPR101Q96P66 508 aaPredicted RBP14.75□□□□□ -0.05
AP3B1-203ENST00000517940 SIL1Q9H173 461 aa14.75□□□□□ -0.05
AP3B1-203ENST00000517940 HDAC5Q9UQL6 1122 aa14.75□□□□□ -0.05
AP3B1-203ENST00000517940 NOP58Q9Y2X3 529 aaKnown RBP14.75□□□□□ -0.05
AP3B1-203ENST00000517940 CHD4Q14839 1912 aa14.74□□□□□ -0.05
AP3B1-203ENST00000517940 DICER1Q9UPY3 1922 aaKnown RBP14.74□□□□□ -0.05
AP3B1-203ENST00000517940 SASH1O94885 1247 aa14.74□□□□□ -0.05
AP3B1-203ENST00000517940 KLRK1P26718 216 aa14.74□□□□□ -0.05
AP3B1-203ENST00000517940 IGHMBP2P38935 993 aaKnown RBP14.74□□□□□ -0.05
AP3B1-203ENST00000517940 LDHAL6AQ6ZMR3 332 aa14.74□□□□□ -0.05
AP3B1-203ENST00000517940 HELBQ8NG08 1087 aaPredicted RBP14.74□□□□□ -0.05
AP3B1-203ENST00000517940 PODXL2Q9NZ53 605 aa14.74□□□□□ -0.05
AP3B1-203ENST00000517940 POLLQ9UGP5 575 aa14.74□□□□□ -0.05
AP3B1-203ENST00000517940 SCN9AQ15858 1988 aa14.73□□□□□ -0.05
AP3B1-203ENST00000517940 CIAO1O76071 339 aa14.73□□□□□ -0.05
AP3B1-203ENST00000517940 TMC4Q7Z404 712 aa14.73□□□□□ -0.05
AP3B1-203ENST00000517940 RTFDC1Q9BY42 306 aaPredicted RBP14.73□□□□□ -0.05
AP3B1-203ENST00000517940 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
AP3B1-203ENST00000517940 LTBP3Q9NS15 1303 aa14.72□□□□□ -0.05
AP3B1-203ENST00000517940 TAF5LO75529 589 aa14.72□□□□□ -0.05
AP3B1-203ENST00000517940 IGHDP01880 384 aa14.72□□□□□ -0.05
AP3B1-203ENST00000517940 CCDC93Q567U6 631 aa14.72□□□□□ -0.05
AP3B1-203ENST00000517940 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
AP3B1-203ENST00000517940 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
AP3B1-203ENST00000517940 EXOC6BQ9Y2D4 811 aa14.72□□□□□ -0.05
AP3B1-203ENST00000517940 FGFR2P21802 821 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 HDAC1Q13547 482 aaPredicted RBP14.71□□□□□ -0.05
AP3B1-203ENST00000517940 TAF7LQ5H9L4 462 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 TBC1D16Q8TBP0 767 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 PSMD1Q99460 953 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 MPHOSPH8Q99549 860 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 CNNM1Q9NRU3 951 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 ZNF609O15014 1411 aa14.71□□□□□ -0.05
AP3B1-203ENST00000517940 XDHP47989 1333 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 FKBP4Q02790 459 aaKnown RBP eCLIP14.7□□□□□ -0.06
AP3B1-203ENST00000517940 AAMPQ13685 434 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 GPR162Q16538 588 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 CC2D2BQ6DHV5 1058 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 MPNDQ8N594 471 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
AP3B1-203ENST00000517940 MROH5Q6ZUA9 1318 aa14.69□□□□□ -0.06
AP3B1-203ENST00000517940 PSME4Q14997 1843 aa14.69□□□□□ -0.06
AP3B1-203ENST00000517940 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
AP3B1-203ENST00000517940 TFCP2Q12800 502 aa14.69□□□□□ -0.06
AP3B1-203ENST00000517940 ZNF277Q9NRM2 450 aaPredicted RBP14.69□□□□□ -0.06
AP3B1-203ENST00000517940 NSFL1CQ9UNZ2 370 aaKnown RBP14.69□□□□□ -0.06
AP3B1-203ENST00000517940 UFL1O94874 794 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 PDE8BO95263 885 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 IL15P40933 162 aaPredicted RBP14.68□□□□□ -0.06
AP3B1-203ENST00000517940 METTL24Q5JXM2 366 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 SOGA3Q5TF21 947 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 DPP8Q6V1X1 898 aaPredicted RBP14.68□□□□□ -0.06
AP3B1-203ENST00000517940 ARHGAP27Q6ZUM4 889 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 RTKN2Q8IZC4 609 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
AP3B1-203ENST00000517940 ZNF804BA4D1E1 1349 aa14.67□□□□□ -0.06
AP3B1-203ENST00000517940 ADORA1P30542 326 aa14.67□□□□□ -0.06
AP3B1-203ENST00000517940 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
AP3B1-203ENST00000517940 GGA1Q9UJY5 639 aa14.67□□□□□ -0.06
AP3B1-203ENST00000517940 MED23Q9ULK4 1368 aa14.67□□□□□ -0.06
AP3B1-203ENST00000517940 COL1A1P02452 1464 aaPredicted RBP14.67□□□□□ -0.06
AP3B1-203ENST00000517940 HMMRO75330 724 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 ATP2B4P23634 1241 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 AOC3Q16853 763 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 C15orf52Q6ZUT6 534 aaKnown RBP14.66□□□□□ -0.06
AP3B1-203ENST00000517940 ANKRD2Q9GZV1 360 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
AP3B1-203ENST00000517940 LEMD3Q9Y2U8 911 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 AKAP11Q9UKA4 1901 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
AP3B1-203ENST00000517940 YDJCA8MPS7 323 aa14.65□□□□□ -0.06
AP3B1-203ENST00000517940 SMARCA5O60264 1052 aaPredicted RBP14.65□□□□□ -0.06
AP3B1-203ENST00000517940 IARSP41252 1262 aaKnown RBP14.65□□□□□ -0.06
AP3B1-203ENST00000517940 KIAA2012Q0VF49 1180 aa14.65□□□□□ -0.06
AP3B1-203ENST00000517940 G3BP1Q13283 466 aaKnown RBP eCLIP14.65□□□□□ -0.069e-10■■□□□ 12.8
AP3B1-203ENST00000517940 SMC5Q8IY18 1101 aa14.65□□□□□ -0.06
AP3B1-203ENST00000517940 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
AP3B1-203ENST00000517940 EAF2Q96CJ1 260 aaPredicted RBP14.65□□□□□ -0.06
AP3B1-203ENST00000517940 GRIN3BO60391 1043 aa14.64□□□□□ -0.07
AP3B1-203ENST00000517940 TIMM10P62072 90 aa14.64□□□□□ -0.07
AP3B1-203ENST00000517940 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
AP3B1-203ENST00000517940 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
AP3B1-203ENST00000517940 GRIPAP1Q4V328 841 aa14.64□□□□□ -0.07
AP3B1-203ENST00000517940 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
AP3B1-203ENST00000517940 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
AP3B1-203ENST00000517940 CEP126Q9P2H0 1117 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms