RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DCAF11Q8TEB1 546 aa6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 NSUN5Q96P11 429 aaKnown RBP6.16□□□□□ -1.42
RNU4-49P-201ENST00000516080 XP32Q5T750 250 aa6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 TTC39BQ5VTQ0 682 aaPredicted RBP6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 MAP4K3Q8IVH8 894 aa6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 Q8N3U1 123 aa6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 OR13H1Q8NG92 308 aa6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 MUC3BQ9H195 1237 aa6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 SRA1Q9HD15 236 aaKnown RBP6.15□□□□□ -1.42
RNU4-49P-201ENST00000516080 ARID3CA6NKF2 412 aa6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 PPP1R15AO75807 674 aaPredicted RBP6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 RPLP1P05386 114 aaKnown RBP6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 HYAL2Q12891 473 aa6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 ZMYM1Q5SVZ6 1142 aa6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 GDF6Q6KF10 455 aaPredicted RBP6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 IL22RA1Q8N6P7 574 aa6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 GPR152Q8TDT2 470 aa6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 SPACA7Q96KW9 195 aa6.14□□□□□ -1.43
RNU4-49P-201ENST00000516080 DLL1O00548 723 aa6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 ZBTB39O15060 712 aa6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 DEAF1O75398 565 aaPredicted RBP6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 WFDC12Q8WWY7 111 aa6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 TP53INP1Q96A56 240 aa6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 SLAIN2Q9P270 581 aa6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 SEPT3Q9UH03 358 aa6.13□□□□□ -1.43
RNU4-49P-201ENST00000516080 SCNN1AP37088 669 aa6.12□□□□□ -1.43
RNU4-49P-201ENST00000516080 IREB2P48200 963 aaKnown RBP6.12□□□□□ -1.43
RNU4-49P-201ENST00000516080 PDE12Q6L8Q7 609 aaKnown RBP6.12□□□□□ -1.43
RNU4-49P-201ENST00000516080 SSBP4Q9BWG4 385 aaPredicted RBP6.12□□□□□ -1.43
RNU4-49P-201ENST00000516080 ABI2Q9NYB9 513 aaPredicted RBP6.12□□□□□ -1.43
RNU4-49P-201ENST00000516080 SMNDC1O75940 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 PCSK2P16519 638 aa6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 PRSS36Q5K4E3 855 aa6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 CCDC82Q8N4S0 544 aa6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 HELQQ8TDG4 1101 aa6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 TRIM33Q9UPN9 1127 aa6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 PPME1Q9Y570 386 aa6.11□□□□□ -1.43
RNU4-49P-201ENST00000516080 NOS3P29474 1203 aa6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 SETDB1Q15047 1291 aa6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 TMEM130Q8N3G9 435 aa6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 TTC16Q8NEE8 873 aa6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 NUDT16Q96DE0 195 aaKnown RBP6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 AKTIPQ9H8T0 292 aa6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 ELP3Q9H9T3 547 aa6.1□□□□□ -1.43
RNU4-49P-201ENST00000516080 KIF4AO95239 1232 aa6.09□□□□□ -1.43
RNU4-49P-201ENST00000516080 NOM1Q5C9Z4 860 aaKnown RBP6.09□□□□□ -1.43
RNU4-49P-201ENST00000516080 COL13A1Q5TAT6 717 aaPredicted RBP6.09□□□□□ -1.43
RNU4-49P-201ENST00000516080 CEP135Q66GS9 1140 aa6.09□□□□□ -1.43
RNU4-49P-201ENST00000516080 ZNF438Q7Z4V0 828 aa6.09□□□□□ -1.43
RNU4-49P-201ENST00000516080 SCO2A0A1W2PP80 73 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 FAM177BA6PVY3 158 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 SSFA2P28290 1259 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 CDC27P30260 824 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 ATP11AP98196 1134 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 ALKBH2Q6NS38 261 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 XKR5Q6UX68 686 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 ATCAYQ86WG3 371 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 NCAPG2Q86XI2 1143 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 GTF3C2Q8WUA4 911 aaPredicted RBP6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 MTMR7Q9Y216 660 aa6.08□□□□□ -1.44
RNU4-49P-201ENST00000516080 TMEM88BA6NKF7 163 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 F8W735 103 aaPredicted RBP6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 PTPRAP18433 802 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 MZF1P28698 734 aaPredicted RBP6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 DNM1Q05193 864 aaKnown RBP6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 FAM117BQ6P1L5 589 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 DZIP1LQ8IYY4 767 aaKnown RBP6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 CEP120Q8N960 986 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 EDEM1Q92611 657 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 MEGF10Q96KG7 1140 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 LACRTQ9GZZ8 138 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 RASSF4Q9H2L5 321 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 TMEM63CQ9P1W3 806 aa6.07□□□□□ -1.44
RNU4-49P-201ENST00000516080 LINC01387J3KSC0 135 aa6.06□□□□□ -1.44
RNU4-49P-201ENST00000516080 CYP2E1P05181 493 aaPredicted RBP6.06□□□□□ -1.44
RNU4-49P-201ENST00000516080 FOXD4L6Q3SYB3 417 aaPredicted RBP6.06□□□□□ -1.44
RNU4-49P-201ENST00000516080 FOXD4L3Q6VB84 417 aaPredicted RBP6.06□□□□□ -1.44
RNU4-49P-201ENST00000516080 PMEPA1Q969W9 287 aa6.06□□□□□ -1.44
RNU4-49P-201ENST00000516080 PDGFAP04085 211 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 CES1P23141 567 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 MPSTP25325 297 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 EIF1AXP47813 144 aaKnown RBP6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 C8orf34Q49A92 452 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 ARTNQ5T4W7 220 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 KLHL23Q8NBE8 558 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 CNTN3Q9P232 1028 aa6.05□□□□□ -1.44
RNU4-49P-201ENST00000516080 FSCN2O14926 492 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 FAM13AO94988 1023 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 ALX3O95076 343 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 NPR3P17342 541 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 USP5P45974 858 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 PRR23CQ6ZRP0 262 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 Q6ZS46 218 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 GALNT11Q8NCW6 608 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
RNU4-49P-201ENST00000516080 GGNBP2Q9H3C7 697 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms